RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 COX5AP20674 150 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 FHITP49789 147 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 CLINT1Q14677 625 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 PLCXD3Q63HM9 321 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 RPRMLQ8N4K4 120 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 ZNF71Q9NQZ8 489 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 FAM221AA4D161 298 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 NKX2-6A6NCS4 301 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 ZNF732B4DXR9 585 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 C1QL1O75973 258 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 PRH1P02810 166 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 TMPRSS3P57727 454 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 TGFBR3Q03167 851 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 PLP2Q04941 152 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 GABRA6Q16445 453 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 MYPOPQ86VE0 399 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 ZNF611Q8N823 705 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 NANOS1Q8WY41 292 aaKnown RBP10.59□□□□□ -0.71
COL4A6-204ENST00000461897 IL22RA2Q969J5 263 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 TCEAL7Q9BRU2 100 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 SLC25A31Q9H0C2 315 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 PLEKHF2Q9H8W4 249 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 Q9N2K0 584 aa10.59□□□□□ -0.71
COL4A6-204ENST00000461897 A0A1W2PR80 420 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 IGSF23A1L1A6 192 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 WDR1O75083 606 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 NGFP01138 241 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 CGAP01215 116 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 UCP1P25874 307 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 WNT5AP41221 380 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 SULT1A1P50225 295 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 TDGF1P3P51864 188 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 BAXQ07812 192 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 KRTCAP3Q53RY4 240 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 NMSQ5H8A3 153 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 CALHM1Q8IU99 346 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
COL4A6-204ENST00000461897 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 NAXEQ8NCW5 288 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 GTF3AQ92664 365 aaKnown RBP10.58□□□□□ -0.72
COL4A6-204ENST00000461897 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-204ENST00000461897 STARD4Q96DR4 205 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF442Q9H7R0 627 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 PLSCR4Q9NRQ2 329 aa10.58□□□□□ -0.72
COL4A6-204ENST00000461897 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 A6NLC8 198 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 M0R036 132 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 CELA3BP08861 270 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 WNT2P09544 360 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FAM87AP0C7U9 286 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF14P17017 642 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 AKR1C3P42330 323 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ID3Q02535 119 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 TMEM252Q8N6L7 170 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 LILRB1Q8NHL6 650 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 PIGCQ92535 297 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF251Q9BRH9 671 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 PAPOLGQ9BWT3 736 aaKnown RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 UNKLQ9H9P5 680 aaKnown RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 OR7C1O76099 320 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 TK1P04183 234 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 S100A6P06703 90 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 CTXN2P0C2S0 81 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 APLNRP35414 380 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FGF12P61328 243 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 MPV17LQ2QL34 196 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 C1orf185Q5T7R7 199 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 DPPA3Q6W0C5 159 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 SLC25A26Q70HW3 274 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 TBC1D26Q86UD7 250 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ODF3L1Q8IXM7 274 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 ZNF610Q8N9Z0 462 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FAM57AQ8TBR7 257 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 OPN3Q9H1Y3 402 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-204ENST00000461897 FBXO7Q9Y3I1 522 aa10.57□□□□□ -0.72
COL4A6-204ENST00000461897 TRBV6-6A0A0A6YYG2 114 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 KIR2DS1A0A191URI9 304 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 HSPA12AO43301 675 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 GLI4P10075 376 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 VDAC1P21796 283 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 KIR2DS4P43632 304 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 NPBWR2P48146 333 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 UCNP55089 124 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 KIR2DS1Q14954 304 aa10.56□□□□□ -0.72
COL4A6-204ENST00000461897 OR8G1Q15617 311 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms