RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 NCMAPQ5T1S8 102 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ZNF880Q6PDB4 577 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 TMUB2Q71RG4 321 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 TBC1D26Q86UD7 250 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ZNF546Q86UE3 836 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 FAM90A1Q86YD7 464 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ZNF695Q8IW36 515 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 H1FOOQ8IZA3 346 aaPredicted RBP5.71□□□□□ -1.5
MSH2-204ENST00000461394 GAPTQ8N292 157 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 CD177Q8N6Q3 437 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 TPRX1Q8N7U7 411 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 INO80EQ8NBZ0 244 aaPredicted RBP5.71□□□□□ -1.5
MSH2-204ENST00000461394 GALNT11Q8NCW6 608 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 OR10V1Q8NGI7 309 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 OR1L1Q8NH94 360 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 PPP1R1CQ8WVI7 109 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 DCUN1D4Q92564 292 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 GALMQ96C23 342 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 SNX22Q96L94 193 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 C2orf50Q96LR7 162 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 CABLES2Q9BTV7 478 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ARL6Q9H0F7 186 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 CCL28Q9NRJ3 127 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 OR1A1Q9P1Q5 309 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 PPP1R3CQ9UQK1 317 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 OR2W1Q9Y3N9 320 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 RNF115Q9Y4L5 304 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 APC2O95996 2303 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 DYSFO75923 2080 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ACACAQ13085 2346 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TRBV6-7A0A0A0MS04 114 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TRAV14DV4A0A0A6YYC5 116 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 IGKV1D-13A0A0B4J2D9 117 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 IGKV1-6A0A0C4DH72 117 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.7□□□□□ -1.5
MSH2-204ENST00000461394 A0A1B0GWJ7 208 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 KANTRA0A1W2PQU2 76 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 MEX3AA1L020 520 aaKnown RBP5.7□□□□□ -1.5
MSH2-204ENST00000461394 TUBAL3A6NHL2 446 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 HMSDA8MTL9 139 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 C17orf100A8MU93 164 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 E7EQL1 145 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 G3V3Q6 166 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 MPPED1O15442 326 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TUSC2O75896 110 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 AVPP01185 164 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 IFNA7P01567 189 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 CD8AP01732 235 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 HBZP02008 142 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 RLN2P04090 185 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 IGKV1-13P0DP09 117 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 HLA-GP17693 338 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 CXCL2P19875 107 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 LMO1P25800 156 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 PSMB6P28072 239 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 APOBEC3AP31941 199 aaPredicted RBP5.7□□□□□ -1.5
MSH2-204ENST00000461394 S100A11P31949 105 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 PLA2G5P39877 138 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 GLIPR1P48060 266 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ID3Q02535 119 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TMEM187Q14656 261 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 HMGN3Q15651 99 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 BEX5Q5H9J7 111 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 FAM201AQ5SY85 155 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TMEM268Q5VZI3 342 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 GGNBP1Q5YKI7 109 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 THOC7Q6I9Y2 204 aaKnown RBP5.7□□□□□ -1.5
MSH2-204ENST00000461394 C11orf87Q6NUJ2 197 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 TRAT1Q6PIZ9 186 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ZNF818PQ6ZRF7 136 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ZNF767PQ75MW2 155 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 C1orf87Q8N0U7 546 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 GCSAMQ8N6F7 178 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 OR51H1Q8NH63 302 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 LILRB4Q8NHJ6 448 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 NEUROG1Q92886 237 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ARL11Q969Q4 196 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 ERGIC1Q969X5 290 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 NMES1Q9C002 83 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 SAP30LQ9HAJ7 183 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 GCM1Q9NP62 436 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 MBD2Q9UBB5 411 aa5.7□□□□□ -1.5
MSH2-204ENST00000461394 LSM5Q9Y4Y9 91 aaKnown RBP5.7□□□□□ -1.5
MSH2-204ENST00000461394 SHANK1Q9Y566 2161 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 IGKV1D-17A0A075B6S4 117 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 IGHV3-43A0A0B4J1X8 118 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 A0A0D9SG52 128 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 DBX1A6NMT0 343 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 RNF212BA8MTL3 300 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 SHISA9B4DS77 424 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 C12orf77C9JDV5 145 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 MGST3O14880 152 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 MPC2O95563 127 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 GYPAP02724 150 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 SERPINE2P07093 398 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 OR8U9P0C7N5 309 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 IGHV3-43DP0DP04 118 aa5.69□□□□□ -1.5
MSH2-204ENST00000461394 SLC25A4P12235 298 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms