RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CRYGDP07320 174 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 IVLP07476 585 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 FBP1P09467 338 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 LIMS3P0CW19 117 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 LIMS4P0CW20 117 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SCGB1C2P0DMR2 95 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR12D1P0DN82 309 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ORM2P19652 201 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CXCL3P19876 107 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 PYCR1P32322 319 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 PPP1CCP36873 323 aaKnown RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 DNASE1L1P49184 302 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 VSNL1P62760 191 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 GTF2BQ00403 316 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CD164Q04900 197 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 FLOT2Q14254 428 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 STK38Q15208 465 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ZNHIT3Q15649 155 aaPredicted RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TOMM34Q15785 309 aaPredicted RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 BCL2A1Q16548 175 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 PSG3Q16557 428 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 C4orf26Q17RF5 130 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 BSXQ3C1V8 233 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MESTQ5EB52 335 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CLEC12AQ5QGZ9 265 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 C10orf91Q5T1B1 145 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 IDNKQ5T6J7 187 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SPATA31B1PQ5VZV4 182 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 EBLN2Q6P2I7 272 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 UGT2A3Q6UWM9 527 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 COPS6Q7L5N1 327 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SSX7Q7RTT5 188 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OLIG3Q7RTU3 272 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CYP4Z1Q86W10 505 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 FUNDC1Q8IVP5 155 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ZNF567Q8N184 647 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SPICQ8N5J4 248 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TMEM75Q8N9X5 138 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 Q8NAQ8 132 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR5D18Q8NGL1 313 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR9I1Q8NGQ6 314 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR5H2Q8NGV7 314 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR11L1Q8NGX0 322 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR6K2Q8NGY2 324 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MFSD8Q8NHS3 518 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 UBA3Q8TBC4 463 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SCGB1C1Q8TD33 95 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 DOK4Q8TEW6 326 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 DNAJB3Q8WWF6 145 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 NELFBQ8WX92 580 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 IFT81Q8WYA0 676 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 DDIT4LQ96D03 193 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MRAP2Q96G30 205 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MRPL48Q96GC5 212 aaKnown RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MSANTD3Q96H12 275 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 BIRC8Q96P09 236 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OLFM3Q96PB7 478 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR8B2Q96RD0 313 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TRIB3Q96RU7 358 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CYTH2Q99418 400 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 GPR22Q99680 433 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 B9D2Q9BPU9 175 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TXNDC17Q9BRA2 123 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 FAAP24Q9BTP7 215 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MED10Q9BTT4 135 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 THTPAQ9BU02 230 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 CHST5Q9GZS9 411 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ARL6Q9H0F7 186 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ALX4Q9H161 411 aaPredicted RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 OR2D2Q9H210 308 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TUBA4BQ9H853 241 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ZNF286AQ9HBT8 521 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 EURLQ9NYK6 297 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 DNAJC27Q9NZQ0 273 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 VAPAQ9P0L0 249 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SLC7A11Q9UPY5 501 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 C14orf166Q9Y224 244 aaKnown RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 LINC00588Q9Y4M8 146 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 AMMECR1Q9Y4X0 333 aaPredicted RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 PHLDA3Q9Y5J5 127 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 MINOS1-NBL1R4GNA1 71 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 NPHP4O75161 1426 aaPredicted RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ATRNO75882 1429 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 EML6Q6ZMW3 1958 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 SCN10AQ9Y5Y9 1956 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ZNF106Q9H2Y7 1883 aaKnown RBP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 NRCAMQ92823 1304 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 AQRO60306 1485 aaKnown RBP eCLIP0.25□□□□□ -2.37
PTPN22-203ENST00000460620 HECW1Q76N89 1606 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 RAB3GAP2Q9H2M9 1393 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 ARAP3Q8WWN8 1544 aa0.25□□□□□ -2.37
PTPN22-203ENST00000460620 TRAV8-2A0A0B4J237 113 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 A0A1B0GU33 70 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 LOC102725191A0A1B0GVB3 256 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 A0A1W2PRG6 482 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 FABP12A6NFH5 140 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 METTL15A6NJ78 407 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 IQCF5A8MTL0 148 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 C17orf98A8MV24 154 aa0.24□□□□□ -2.37
PTPN22-203ENST00000460620 EFCAB9A8MZ26 197 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms