RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TAAR3PQ9P1P4 343 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TRAPPC2LQ9UL33 140 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 MBD3L4A6NDZ8 208 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 MBD3L3A6NE82 208 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 MBD3L5A6NJ08 208 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 CECR9P0C854 216 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 SLC25A6P12236 298 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 MUC1P15941 1255 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 LMO1P25800 156 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 EIF2S3P41091 472 aaKnown RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 P2RY6Q15077 328 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 SWI5Q1ZZU3 235 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 STARD4Q96DR4 205 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 OPN3Q9H1Y3 402 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 CXXC4Q9H2H0 198 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 TREM1Q9NP99 234 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 ZNF71Q9NQZ8 489 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 PROCRQ9UNN8 238 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 CFAP47Q6ZTR5 3102 aa14.09□□□□□ -0.15
CCDC43-202ENST00000457422 INTS1Q8N201 2190 aaKnown RBP14.09□□□□□ -0.15
CCDC43-202ENST00000457422 F8W036 122 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 HAND1O96004 215 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 IGLV2-14P01704 120 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 C11orf53Q8IXP5 236 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 C1orf174Q8IYL3 243 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 ZNF610Q8N9Z0 462 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 SLC25A31Q9H0C2 315 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 PLEKHF2Q9H8W4 249 aa14.08□□□□□ -0.15
CCDC43-202ENST00000457422 FAM24AA6NFZ4 105 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 PITX3O75364 302 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 CD5P06127 495 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 HEXAP06865 529 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 CEBPDP49716 269 aaPredicted RBP14.08□□□□□ -0.16
CCDC43-202ENST00000457422 RAB5CP51148 216 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 RTP5Q14D33 572 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 CXorf66Q5JRM2 361 aaPredicted RBP14.08□□□□□ -0.16
CCDC43-202ENST00000457422 PUSL1Q8N0Z8 303 aaKnown RBP14.08□□□□□ -0.16
CCDC43-202ENST00000457422 PRR18Q8N4B5 295 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 PRSS33Q8NF86 280 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 UBALD1Q8TB05 177 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 FZR1Q9UM11 496 aa14.08□□□□□ -0.16
CCDC43-202ENST00000457422 A0A1B0GWJ7 208 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 IGSF23A1L1A6 192 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 NUPL2O15504 423 aaKnown RBP14.07□□□□□ -0.16
CCDC43-202ENST00000457422 SSSCA1O60232 199 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 CEACAM1P13688 526 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 GUCA2BQ16661 112 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 MBNL2Q5VZF2 373 aaKnown RBP14.07□□□□□ -0.16
CCDC43-202ENST00000457422 OR14J1Q9UGF5 321 aa14.07□□□□□ -0.16
CCDC43-202ENST00000457422 A0A1B0GU03 582 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 RNASEK-C17orf49H0YIS7 233 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 ID4P47928 161 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 ZNF266Q14584 549 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 ZNF826PQ6ZT77 177 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 COMMD1Q8N668 190 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 TMEM252Q8N6L7 170 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 OR51H1Q8NH63 302 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 MAGT1Q9H0U3 335 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 LUZP4Q9P127 313 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 FAM96BQ9Y3D0 163 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 STRAPQ9Y3F4 350 aaKnown RBP14.06□□□□□ -0.16
CCDC43-202ENST00000457422 RNF115Q9Y4L5 304 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 ZNF292O60281 2723 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 IGHV2OR16-5A0A0B4J2B6 119 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 OR5H1A6NKK0 313 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 WNT9BO14905 357 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 TIMM8AO60220 97 aaPredicted RBP14.06□□□□□ -0.16
CCDC43-202ENST00000457422 SERPINE2P07093 398 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 PSG2P11465 335 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 VAMP2P63027 116 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
CCDC43-202ENST00000457422 BAXQ07812 192 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 ZNF718Q3SXZ3 478 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 Q6ZR03 302 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 BHLHA15Q7RTS1 189 aaPredicted RBP14.06□□□□□ -0.16
CCDC43-202ENST00000457422 PRR7Q8TB68 274 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 LSM10Q969L4 123 aaKnown RBP14.06□□□□□ -0.16
CCDC43-202ENST00000457422 PRR14LQ5THK1 2151 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
CCDC43-202ENST00000457422 TMEM30CPA0ZSE6 113 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 FAM74A7A6NL05 159 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 HSPA12AO43301 675 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 PSPNO60542 156 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 ASCL1P50553 236 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 DVL1P1P54792 670 aaPredicted RBP14.05□□□□□ -0.16
CCDC43-202ENST00000457422 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 SLC35E4Q6ICL7 350 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 ACP7Q6ZNF0 438 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 BEND4Q6ZU67 534 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 PARP12Q9H0J9 701 aaKnown RBP14.05□□□□□ -0.16
CCDC43-202ENST00000457422 CACFD1Q9UGQ2 172 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 A0A0G2JRQ6 117 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 FAM157AC9JC47 383 aa14.05□□□□□ -0.16
CCDC43-202ENST00000457422 PROB1E7EW31 1015 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms