RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 IGKV1-33P01594 117 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 IGHV3-43DP0DP04 118 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 RCC1P18754 421 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-210ENST00000457104 EBI3Q14213 229 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 HNF4GQ14541 408 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 C9orf152Q5JTZ5 239 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 SYT6Q5T7P8 510 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-210ENST00000457104 NKAIN3Q8N8D7 197 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 ZNF439Q8NDP4 499 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 OR4K15Q8NH41 348 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 MYDGFQ969H8 173 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 UQCC2Q9BRT2 126 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 PEX16Q9Y5Y5 336 aa9.81□□□□□ -0.84
VEGFA-210ENST00000457104 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 CCRL2O00421 344 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 SLC31A2O15432 143 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 CRTAPO75718 401 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-210ENST00000457104 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-210ENST00000457104 GAPDHP04406 335 aaKnown RBP9.8□□□□□ -0.84
VEGFA-210ENST00000457104 GLAP06280 429 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 CD37P11049 281 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 TMEM11P17152 192 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 FUT3P21217 361 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 MAPK3P27361 379 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-210ENST00000457104 REG1BP48304 166 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 ZNF134P52741 427 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 AQP4P55087 323 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 SLC35A2P78381 396 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 HES1Q14469 280 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 IRF3Q14653 427 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 SPHARQ15513 63 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 C5orf24Q7Z6I8 188 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 MS4A15Q8N5U1 240 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 Q8N6K4 173 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 THRSPQ92748 146 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 MND1Q9BWT6 205 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 VCXQ9H320 206 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 ETAA1Q9NY74 926 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 TRAPPC2LQ9UL33 140 aa9.8□□□□□ -0.84
VEGFA-210ENST00000457104 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-210ENST00000457104 IGHV3-72A0A0B4J1Y9 119 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 UBE2QL1A1L167 161 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 H0YHG0 523 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 FGF16O43320 207 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 HBZP02008 142 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 ZNF137PP52743 207 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 GABPB1Q06547 395 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 Q3ZCU0 254 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 CT45A1Q5HYN5 189 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 C1orf100Q5SVJ3 147 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 MOB3BQ86TA1 216 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 IZUMO1Q8IYV9 350 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 RTN4IP1Q8WWV3 396 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 PHYHIPQ92561 330 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 FAM46BQ96A09 425 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 RBMXL1Q96E39 390 aaKnown RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 DUSP21Q9H596 190 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 PLSCR3Q9NRY6 295 aa9.79□□□□□ -0.84
VEGFA-210ENST00000457104 MBNL3Q9NUK0 354 aaKnown RBP9.79□□□□□ -0.84
VEGFA-210ENST00000457104 LINC01548A6NM66 108 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-210ENST00000457104 SPINT2O43291 252 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 PDCD6O75340 191 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 CA11O75493 328 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 IGHG2P01859 326 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 GPR50Q13585 617 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 C6orf183Q5T699 404 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 OR10K2Q6IF99 312 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 ZNF329Q86UD4 541 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 OR4X2Q8NGF9 303 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 OR10V1Q8NGI7 309 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 MRPL30Q8TCC3 161 aaKnown RBP9.78□□□□□ -0.84
VEGFA-210ENST00000457104 TAF9BQ9HBM6 251 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 SCN3BQ9NY72 215 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 GHRLQ9UBU3 117 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 COL7A1Q02388 2944 aa9.78□□□□□ -0.84
VEGFA-210ENST00000457104 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 MPIG6BO95866 241 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 UCHL1P09936 223 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 UBBP0CG47 229 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 SRMP19623 302 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 MYF6P23409 242 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 CHATP28329 748 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 CD1BP29016 333 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 QRFPP83859 136 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 UNC119Q13432 240 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 GNMTQ14749 295 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 MED22Q15528 200 aa9.77□□□□□ -0.85
VEGFA-210ENST00000457104 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms