RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 COQ3Q9NZJ6 369 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 ADAM20O43506 726 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 VAMP2P63027 116 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 MZT1Q08AG7 82 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 OR1L1Q8NH94 360 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 A0A0G2JNJ9 132 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 A8MXE2 369 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 ERVK11-1P61568 191 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 FAM201AQ5SY85 155 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
CLK3-203ENST00000454830 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 MSI2Q96DH6 328 aaKnown RBP11.53□□□□□ -0.56
CLK3-203ENST00000454830 PARP12Q9H0J9 701 aaKnown RBP11.53□□□□□ -0.56
CLK3-203ENST00000454830 TMEM222Q9H0R3 208 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 Q9UFV3 132 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 IGHV3-13P01766 116 aa11.52□□□□□ -0.56
CLK3-203ENST00000454830 IGHV3-7P01780 117 aa11.52□□□□□ -0.56
CLK3-203ENST00000454830 KITLGP21583 273 aa11.52□□□□□ -0.56
CLK3-203ENST00000454830 SRPXP78539 464 aa11.52□□□□□ -0.56
CLK3-203ENST00000454830 MSMPQ1L6U9 139 aa11.52□□□□□ -0.56
CLK3-203ENST00000454830 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.56
CLK3-203ENST00000454830 B8ZZF3 427 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 C16orf97H3BN30 126 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 K7ENP7 123 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 SCO1O75880 301 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 GLIPR1P48060 266 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 RBPJQ06330 500 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 MOB1BQ7L9L4 216 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 CCDC28AQ8IWP9 274 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 GALMQ96C23 342 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 PIEZO1Q92508 2521 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 NKX2-1P43699 371 aaPredicted RBP11.52□□□□□ -0.57
CLK3-203ENST00000454830 ZNF146Q15072 292 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 IZUMO4Q1ZYL8 232 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 PCSK4Q6UW60 755 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 ZNF497Q6ZNH5 498 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 C22orf34Q6ZV56 151 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 ARL11Q969Q4 196 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 SPIN2AQ99865 258 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 SPIN2BQ9BPZ2 258 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 DCTN5Q9BTE1 182 aa11.52□□□□□ -0.57
CLK3-203ENST00000454830 ABCD4O14678 606 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 SSSCA1O60232 199 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 P2RX3P56373 397 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLK3-203ENST00000454830 FAM53AQ6NSI3 398 aaPredicted RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 FBXL17Q9UF56 701 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 PSG2P11465 335 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 GLRXP35754 106 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 Q8NA96 180 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 DMRTA2Q96SC8 542 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 TRBV6-7A0A0A0MS04 114 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 DEDDO75618 318 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 CEACAM8P31997 349 aaPredicted RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 TMEM33P57088 247 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 SLC25A32Q9H2D1 315 aa11.51□□□□□ -0.57
CLK3-203ENST00000454830 CHD3Q12873 2000 aaKnown RBP11.51□□□□□ -0.57
CLK3-203ENST00000454830 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 E5RGE8 158 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 ATXN7O15265 892 aaPredicted RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 HKR1P10072 659 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 PRDX2P32119 198 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 RPS23P62266 143 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 CLINT1Q14677 625 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 ZNF324BQ6AW86 544 aaPredicted RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 Q6ZS49 121 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 NSG2Q9Y328 171 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 TUBAL3A6NHL2 446 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 HOXD4P09016 255 aaPredicted RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 TUBG1P23258 451 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 CD40P25942 277 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 SSTR5P35346 364 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 PPP1CCP36873 323 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 MRPL37Q9BZE1 423 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 SHARPINQ9H0F6 387 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 RHOFQ9HBH0 211 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 RBMXL2O75526 392 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 EGR1P18146 543 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 F2RP25116 425 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 SPRNQ5BIV9 151 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
CLK3-203ENST00000454830 C18orf12Q96KH6 178 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms