RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FAM118AQ9NWS6 357 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 TXNL1O43396 289 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 GZMHP20718 246 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 MNAT1P51948 309 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 LSAMPQ13449 338 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 CT45A1Q5HYN5 189 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 FDX2Q6P4F2 183 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 CT45A3Q8NHU0 189 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 LRGUKQ96M69 825 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 FAM110AQ9BQ89 295 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 DPCDQ9BVM2 203 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 PRRG3Q9BZD7 231 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 STUB1Q9UNE7 303 aa13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 MRPS28Q9Y2Q9 187 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-209ENST00000454428 C12orf77C9JDV5 145 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 IL3RAP26951 378 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 CRIP2P52943 208 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 PXT1Q8NFP0 134 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 OR10K1Q8NGX5 313 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 NABP2Q9BQ15 211 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 HIPK2Q9H2X6 1198 aa13.13□□□□□ -0.31
UBE2D4-209ENST00000454428 IGHV3-11P01762 117 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 ACTBP60709 375 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 Q3ZCU0 254 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 CCDC107Q8WV48 283 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 DNAH6Q9C0G6 4158 aa13.12□□□□□ -0.31
UBE2D4-209ENST00000454428 A0A1W2PN81 502 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 TMEM30CPA0ZSE6 113 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 AQP12BA6NM10 295 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 OR4C45A6NMZ5 311 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 GABRPO00591 440 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 SULT1B1O43704 296 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 ORC5O43913 435 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 CHRNA7P36544 502 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 ECSCRQ19T08 205 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 IL34Q6ZMJ4 242 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 ANKRD13BQ86YJ7 626 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 AQP12AQ8IXF9 295 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 RSRP1Q9BUV0 290 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 IFT22Q9H7X7 185 aa13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
UBE2D4-209ENST00000454428 LANCL1O43813 399 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 CCR9P51686 369 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 ASCL4Q6XD76 172 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 FLYWCH2Q96CP2 140 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 RHOVQ96L33 236 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 ELOVL1Q9BW60 279 aa13.1□□□□□ -0.31
UBE2D4-209ENST00000454428 NBR2O15453 112 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 FKBP6O75344 327 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 NDUFA3O95167 84 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 MT-ND4P03905 459 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 LRRC36Q1X8D7 754 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 ZNF497Q6ZNH5 498 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 ODF3L1Q8IXM7 274 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 PARP16Q8N5Y8 322 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 NPBQ8NG41 125 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 TMED9Q9BVK6 235 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 ST3GAL6Q9Y274 331 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 FAT2Q9NYQ8 4349 aa13.09□□□□□ -0.31
UBE2D4-209ENST00000454428 J3QRE1 110 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 FAM107AO95990 144 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 RAB40BQ12829 278 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 OR51A2Q8NGJ7 313 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 PELI1Q96FA3 418 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 MRPL20Q9BYC9 149 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 TUBA4BQ9H853 241 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
UBE2D4-209ENST00000454428 GEMIN2O14893 280 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 SLC16A6O15403 523 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 OR7C1O76099 320 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 RGS11O94810 467 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 HTR3BO95264 441 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 LY6G6CO95867 125 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 HTR1AP08908 422 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 HOXB6P17509 224 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 CX3CL1P78423 397 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 RSU1Q15404 277 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 KDM4DQ6B0I6 523 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms