RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DHDHQ9UQ10 334 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 I3L521 148 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 J3QRE1 110 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 AIPO00170 330 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OVOL1O14753 267 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MPZL2O60487 215 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MT-ND2P03891 347 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GAPDHP04406 335 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ISG15P05161 165 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ELANEP08246 267 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RPSAP08865 295 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR8U8P0C7N1 319 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGHV4-30-4P0DP06 118 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GP9P14770 177 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C21orf33P30042 268 aaPredicted RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PPP1CCP36873 323 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 VHLP40337 213 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR3A3P47888 321 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CDX1P47902 265 aaPredicted RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MTNR1BP49286 362 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF134P52741 427 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ADARB1P78563 741 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LSAMPQ13449 338 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ALKBH1Q13686 389 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EBI3Q14213 229 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LRRC36Q1X8D7 754 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZIK1Q3SY52 487 aaPredicted RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SLC22A6Q4U2R8 563 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ATAD3CQ5T2N8 411 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM27D1Q5T7N8 215 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DDI2Q5TDH0 399 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LHFPL3Q86UP9 236 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZDHHC13Q8IUH4 622 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SAXO1Q8IYX7 474 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF439Q8NDP4 499 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR8J1Q8NGP2 316 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR1N2Q8NGR9 330 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR4K15Q8NH41 348 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ABHD5Q8WTS1 349 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SLC7A6OSQ96CW6 309 aaPredicted RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LGALS12Q96DT0 336 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 NRBF2Q96F24 287 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM103A1Q9BTL3 118 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RSRP1Q9BUV0 290 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LINC00574Q9H8X3 128 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM118AQ9NWS6 357 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ST3GAL6Q9Y274 331 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PCLOQ9Y6V0 5065 aa4.63□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DYNC1H1Q14204 4646 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGHV7-81A0A0B4J1V7 117 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TRAV41A0A0B4J266 112 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 A0A1W2PN81 502 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EI24O14681 340 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HBZP02008 142 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DBTP11182 482 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RCC1P18754 421 aaPredicted RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RAB3AP20336 220 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CHRNA7P36544 502 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GP2P55259 537 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ACTBP60709 375 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IL13RA2Q14627 380 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DNAL1Q4LDG9 190 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CT45A1Q5HYN5 189 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ELP2Q6IA86 826 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FDX2Q6P4F2 183 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMEM65Q6PI78 240 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM131AQ6UXB0 335 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GLDNQ6ZMI3 551 aaPredicted RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SLC25A48Q6ZT89 311 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF491Q8N8L2 437 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZFP41Q8N8Y5 198 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF565Q8N9K5 539 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CCDC54Q8NEL0 328 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR52L2PQ8NGH6 319 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR52N1Q8NH53 320 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CT45A3Q8NHU0 189 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RFKQ969G6 155 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ISOC1Q96CN7 298 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MS4A10Q96PG2 267 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ANKRD60Q9BZ19 345 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 BARHL1Q9BZE3 327 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PARP12Q9H0J9 701 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KCNK15Q9H427 330 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EDA2RQ9HAV5 297 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TPSG1Q9NRR2 321 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ADAM30Q9UKF2 790 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ING4Q9UNL4 249 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GAB2Q9UQC2 676 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 VSIG4Q9Y279 399 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SELENOKQ9Y6D0 94 aa4.62□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TRAV8-7A0A075B6U6 113 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PNMA8CA0A1B0GUJ8 204 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 A0A1W2PPK0 400 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMEM212A6NML5 194 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ST8SIA5O15466 376 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ATP6V1G2O95670 118 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms