RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 KCNIP1Q9NZI2 227 aa12.78□□□□□ -0.36
RBM39-219ENST00000453310 ELF5Q9UKW6 265 aaPredicted RBP12.78□□□□□ -0.36
RBM39-219ENST00000453310 SOX21Q9Y651 276 aaPredicted RBP12.78□□□□□ -0.36
RBM39-219ENST00000453310 TRAV18A0A075B6X5 111 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 A0A087X0M5 115 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 A0A1B0GX30 115 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 DPPA5A6NC42 116 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 TMEM235A6NFC5 223 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 POM121CA8CG34 1229 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 F2RL2O00254 374 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 SPINT2O43291 252 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 HBZP02008 142 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 APOA1P02647 267 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 CD34P28906 385 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 HMGN3Q15651 99 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 HACD4Q5VWC8 232 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 IZUMO1Q8IYV9 350 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 OR1L1Q8NH94 360 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 SLC6A7Q99884 636 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 Q9N2K0 584 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.37
RBM39-219ENST00000453310 ODF3BA8MYP8 253 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
RBM39-219ENST00000453310 XRCC3O43542 346 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 ARG1P05089 322 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 FCGR3AP08637 254 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 SAA4P35542 130 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 TALDO1P37837 337 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 GNG2P59768 71 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 MIDNQ504T8 468 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 ZNF626Q68DY1 528 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 ABHD12Q8N2K0 398 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 DTX3Q8N9I9 347 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 NUDCD2Q8WVJ2 157 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 DCUN1D5Q9BTE7 237 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 SLIRPQ9GZT3 109 aaKnown RBP12.76□□□□□ -0.37
RBM39-219ENST00000453310 ZNF286AQ9HBT8 521 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 MGAT4AQ9UM21 535 aa12.76□□□□□ -0.37
RBM39-219ENST00000453310 A0A0U1RQK1 487 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 ELK1P19419 428 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 MNDAP41218 407 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 LOXL3P58215 753 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 PITPNAQ00169 270 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 TUSC1Q2TAM9 212 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 UTF1Q5T230 341 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 OR52M1Q8NGK5 317 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 ZNF48Q96MX3 618 aaPredicted RBP12.75□□□□□ -0.37
RBM39-219ENST00000453310 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
RBM39-219ENST00000453310 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 AUNIPQ9H7T9 357 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 GFOD1Q9NXC2 390 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 NF1P21359 2839 aa12.75□□□□□ -0.37
RBM39-219ENST00000453310 IGHV3-43A0A0B4J1X8 118 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 MDFIC2A0A1B0GVS7 189 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 RGS5O15539 181 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 MELTFP08582 738 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 IGHV3-43DP0DP04 118 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 DTYMKP23919 212 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 LGALS4P56470 323 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 TAS2R20P59543 309 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 DEFB112Q30KQ8 113 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 ZNF596Q8TC21 504 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 GALMQ96C23 342 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 DGCR14Q96DF8 476 aaKnown RBP12.74□□□□□ -0.37
RBM39-219ENST00000453310 GNG12Q9UBI6 72 aa12.74□□□□□ -0.37
RBM39-219ENST00000453310 ZNF230Q9UIE0 474 aaPredicted RBP12.74□□□□□ -0.37
RBM39-219ENST00000453310 CTDSP2O14595 271 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 TOR1AO14656 332 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 SSX5O60225 188 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 IGLV1-47P01700 117 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 PTHLHP12272 177 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 GNG10P50151 68 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 HTD2P86397 168 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 FAM53AQ6NSI3 398 aaPredicted RBP12.73□□□□□ -0.37
RBM39-219ENST00000453310 LAX1Q8IWV1 398 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 SIGLECL1Q8N7X8 197 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 BEND2Q8NDZ0 799 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 OR10V1Q8NGI7 309 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 OR4P4Q8NGL7 312 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 OR9G1Q8NH87 305 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 ZNF418Q8TF45 676 aaPredicted RBP12.73□□□□□ -0.37
RBM39-219ENST00000453310 C17orf50Q8WW18 174 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 MAFIPQ8WZ33 124 aa12.73□□□□□ -0.37
RBM39-219ENST00000453310 C6orf62Q9GZU0 229 aaPredicted RBP12.73□□□□□ -0.37
RBM39-219ENST00000453310 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms