RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SYS1Q8N2H4 156 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 SUMF2Q8NBJ7 301 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 CCDC197Q8NCU1 140 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 TNFAIP8L1Q8WVP5 186 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 PELI1Q96FA3 418 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 GPER1Q99527 375 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 CIB1Q99828 191 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 SPACA1Q9HBV2 294 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 DHDHQ9UQ10 334 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 GMPPBQ9Y5P6 360 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 LYSTQ99698 3801 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 GABRPO00591 440 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 SPINT2O43291 252 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 LANCL1O43813 399 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF780AO75290 641 aaPredicted RBP11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 OR7C1O76099 320 aaPredicted RBP11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 FCGR1AP12314 374 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 SPNP16150 400 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 FASP25445 335 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 RAB9AP51151 201 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 F2RL1P55085 397 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 RBM11P57052 281 aaKnown RBP11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 GABPB1Q06547 395 aaPredicted RBP11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 MMDQ15546 238 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 ZSCAN26Q16670 478 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 OVCH2Q7RTZ1 564 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 STX19Q8N4C7 294 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 MINDY2Q8NBR6 621 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 DCUN1D4Q92564 292 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 CST11Q9H112 138 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 ST3GAL6Q9Y274 331 aa11.07□□□□□ -0.64
LYSMD3-202ENST00000453259 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 LINC01619G3V211 115 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 JTBO76095 146 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 CSTBP04080 98 aaKnown RBP11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 GNB1P62873 340 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 LSAMPQ13449 338 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 PYHIN1Q6K0P9 492 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF497Q6ZNH5 498 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF439Q8NDP4 499 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 OR52N1Q8NH53 320 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 OR5AK2Q8NH90 309 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 TSEN15Q8WW01 171 aaKnown RBP11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 C4orf36Q96KX1 117 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 FAM192AQ9GZU8 254 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 KLK15Q9H2R5 256 aa11.06□□□□□ -0.64
LYSMD3-202ENST00000453259 J3QLW9 94 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 HSPA12AO43301 675 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 CA11O75493 328 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 CD2P06729 351 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 LGALS1P09382 135 aaKnown RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF19P17023 458 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 VHLP40337 213 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 CRIP2P52943 208 aaPredicted RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 SNRPGP62308 76 aaKnown RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 C6orf183Q5T699 404 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF554Q86TJ5 538 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 SGPP2Q8IWX5 399 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 IL17DQ8TAD2 202 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 DLX4Q92988 240 aaPredicted RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 OR4C12Q96R67 309 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 S100A13Q99584 98 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 SPATA25Q9BR10 227 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 TOLLIPQ9H0E2 274 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 METTL9Q9H1A3 318 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 GNG12Q9UBI6 72 aa11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 EXOGQ9Y2C4 368 aaKnown RBP11.05□□□□□ -0.64
LYSMD3-202ENST00000453259 TRAV39A0A0B4J263 110 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 TRIM64CA6NLI5 447 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF736B4DX44 427 aaPredicted RBP11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 AIPO00170 330 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 HTR3BO95264 441 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 MT-ND4P03905 459 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 PITPNAQ00169 270 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 GPR176Q14439 515 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 OR51A2Q8NGJ7 313 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF251Q9BRH9 671 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 ELOVL1Q9BW60 279 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 TMEM138Q9NPI0 162 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
LYSMD3-202ENST00000453259 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 MAGEA13PA6NCF6 341 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 G3V318 75 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 GEMIN2O14893 280 aaKnown RBP11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 NBR2O15453 112 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 IFNA6P05013 189 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 IGHV4-30-4P0DP06 118 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 GTF2F2P13984 249 aa11.03□□□□□ -0.64
LYSMD3-202ENST00000453259 MYF6P23409 242 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms