RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 REG1BP48304 166 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 SYT6Q5T7P8 510 aaPredicted RBP10.24□□□□□ -0.77
CHD3-206ENST00000452447 LAIR2Q6ISS4 152 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 NANOGP1Q8N7R0 232 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 NKAIN3Q8N8D7 197 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 FBLIM1Q8WUP2 373 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 BANF2Q9H503 90 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 PEX16Q9Y5Y5 336 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 FGF16O43320 207 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 CRTAPO75718 401 aaPredicted RBP10.23□□□□□ -0.77
CHD3-206ENST00000452447 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 MGMTP16455 207 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
CHD3-206ENST00000452447 C6orf183Q5T699 404 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 PRR18Q8N4B5 295 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 LINC00311Q8N616 119 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 C5orf56Q8N8D9 126 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 C8orf31Q8N9H6 132 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 OR4K15Q8NH41 348 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 UQCC2Q9BRT2 126 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 RCC2Q9P258 522 aaKnown RBP10.23□□□□□ -0.77
CHD3-206ENST00000452447 GNG12Q9UBI6 72 aa10.23□□□□□ -0.77
CHD3-206ENST00000452447 IGHV1-3A0A0C4DH29 117 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A10PA6NDY2 464 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A7PA6NKC0 464 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 NCBP2LA6PVI3 153 aaKnown RBP10.22□□□□□ -0.77
CHD3-206ENST00000452447 SERPINE3A8MV23 424 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A23PA8MXZ1 464 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 PTGES3LE9PB15 166 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 PIN1P1O15428 100 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 CA11O75493 328 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 LOXL3P58215 753 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 Q3ZCU0 254 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 MS4A15Q8N5U1 240 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 TMEM104Q8NE00 496 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 CHPT1Q8WUD6 406 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 TFAP2CQ92754 450 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 MND1Q9BWT6 205 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 ANKRD60Q9BZ19 345 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FKBP14Q9NWM8 211 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 IGHV3-72A0A0B4J1Y9 119 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 C12orf77C9JDV5 145 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 GLAP06280 429 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 CDK1P06493 297 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FUT3P21217 361 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 SLC35B1P78383 322 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 GPR50Q13585 617 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 ACSM3Q53FZ2 586 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 TRAT1Q6PIZ9 186 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 SLC35E3Q7Z769 313 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 ZNF329Q86UD4 541 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FOXRED2Q8IWF2 684 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 OR2T10Q8NGZ9 312 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 FAM46BQ96A09 425 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 PHF21AQ96BD5 680 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
CHD3-206ENST00000452447 Q96M66 194 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 CST11Q9H112 138 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 SCN3BQ9NY72 215 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 KCNIP1Q9NZI2 227 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 GHRLQ9UBU3 117 aa10.22□□□□□ -0.77
CHD3-206ENST00000452447 UBE2QL1A1L167 161 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 DENRO43583 198 aaKnown RBP10.21□□□□□ -0.78
CHD3-206ENST00000452447 HBZP02008 142 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 IGLL1P15814 213 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 RCC1P18754 421 aaPredicted RBP10.21□□□□□ -0.78
CHD3-206ENST00000452447 SLC35A2P78381 396 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 EBI3Q14213 229 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 FAM53AQ6NSI3 398 aaPredicted RBP10.21□□□□□ -0.78
CHD3-206ENST00000452447 LYPD6Q86Y78 171 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 IZUMO1Q8IYV9 350 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 RTN4IP1Q8WWV3 396 aaPredicted RBP10.21□□□□□ -0.78
CHD3-206ENST00000452447 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.78
CHD3-206ENST00000452447 FAM210AQ96ND0 272 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 BLOC1S6Q9UL45 172 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 LRRC42Q9Y546 428 aa10.21□□□□□ -0.78
CHD3-206ENST00000452447 TXNL1O43396 289 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 IGHG2P01859 326 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 UBBP0CG47 229 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 MYF6P23409 242 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 INSL4Q14641 139 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 SPHARQ15513 63 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 MED22Q15528 200 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 FOXB2Q5VYV0 432 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 RNLSQ5VYX0 342 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 GLT8D1Q68CQ7 371 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 SLC25A48Q6ZT89 311 aaKnown RBP10.2□□□□□ -0.78
CHD3-206ENST00000452447 TGIF2LXQ8IUE1 241 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 GAPTQ8N292 157 aa10.2□□□□□ -0.78
CHD3-206ENST00000452447 OR1L1Q8NH94 360 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms