RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 FAM90A7PA6NKC0 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A22PA8MWA6 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A12PA8MX19 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A5PA8MXJ8 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A23PA8MXZ1 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 J3KT08 172 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 K7N7A8 449 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A15PP0C7V4 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A13PP0C7W8 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A14PP0C7W9 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A24PP0C7X0 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PRSS56P0CW18 603 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C8orf89P0DMQ9 161 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SELEP16581 610 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PSMB5P28074 263 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 APLNRP35414 380 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SUMO3P55854 103 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 CCL7P80098 99 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FUT7Q11130 342 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GAB4Q2WGN9 574 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GAGE13Q4V321 117 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DACT2Q5SW24 774 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SAMD5Q5TGI4 173 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C1orf140Q5VVS0 124 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 Q6AWC8 147 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TMEM108Q6UXF1 575 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CLDN19Q8N6F1 224 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ADAD2Q8NCV1 583 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 ATP6V0E2Q8NHE4 81 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ZNF418Q8TF45 676 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 SOCS4Q8WXH5 440 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 STRADBQ9C0K7 418 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PBOV1Q9GZY1 135 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TXNIPQ9H3M7 391 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 NRN1Q9NPD7 142 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SLC7A10Q9NS82 523 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 B4GALT7Q9UBV7 327 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 COA3Q9Y2R0 106 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 Q9Y3F1 56 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CCL27Q9Y4X3 112 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TRAV8-7A0A075B6U6 113 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A0A0B4J2E0 115 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A0A0G2JK05 382 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A0A0G2JLM5 398 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A0A1B0GX12 115 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PRSS37A4D1T9 235 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 IZUMO1RA6ND01 250 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR2T8A6NH00 312 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LRRC30A6NM36 301 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SYNGR2O43760 224 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR7C1O76099 320 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 ISG15P05161 165 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SPINK8P0C7L1 97 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PSG1P11464 419 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 KLK2P20151 261 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OPRM1P35372 400 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR3A4PP47883 348 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 RRADP55042 308 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FGF8P55075 233 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 UBE2L3P68036 154 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 ARL16Q0P5N6 197 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SGCBQ16585 318 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF260Q3ZCT1 412 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SPANXN5Q5MJ07 72 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 AMMECR1LQ6DCA0 310 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TMEM211Q6ICI0 200 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ANKRD33Q7Z3H0 272 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 Q8IYB0 196 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 C17orf47Q8NEP4 570 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 NOXO1Q8NFA2 376 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 GJC3Q8NFK1 279 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 DOK4Q8TEW6 326 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ASB10Q8WXI3 467 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LSM10Q969L4 123 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 PERPQ96FX8 193 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 Q96M85 177 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OCIAD1Q9NX40 245 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF835Q9Y2P0 537 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LRP12Q9Y561 859 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 WDR90Q96KV7 1748 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PARP14Q460N5 1801 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SIP14410 1827 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 IGHV2OR16-5A0A0B4J2B6 119 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CCL15-CCL14A0A0B4J2E2 113 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LRRC3CA6NJW4 275 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 C17orf105B2RV13 164 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 M0QZQ0 153 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ATXN7O15265 892 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 KLF7O75840 302 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 C1QL1O75973 258 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZIC2O95409 532 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 GPR75O95800 540 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CD160O95971 181 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TIMP1P01033 207 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ATP5G1P05496 136 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 POU2F2P09086 479 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CEACAM3P40198 252 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 VIPR2P41587 438 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms