RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 HHEXQ03014 270 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 FUT5Q11128 374 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 OR5AS1Q8N127 324 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 BHLHE23Q8NDY6 225 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MRPL24Q96A35 216 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GTSF1LQ9H1H1 148 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 TRPM7Q96QT4 1865 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 TRAV8-2A0A0B4J237 113 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 A0A1W2PR80 420 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 DUX1O43812 170 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MEF2BQ02080 365 aaPredicted RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 RPL18Q07020 188 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 SRSF4Q08170 494 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 DUSP8Q13202 625 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MYBPHQ13203 477 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 PSG5Q15238 335 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 PRTGQ2VWP7 1150 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 OR4F17Q8NGA8 305 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 EDARADDQ8WWZ3 215 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 EPHX3Q9H6B9 360 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 FNDC4Q9H6D8 234 aaPredicted RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 POLDIP2Q9Y2S7 368 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 PIAS3Q9Y6X2 628 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 PRSS37A4D1T9 235 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 M0R135 149 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GDF9O60383 454 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 ACTL6AO96019 429 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 TIMP1P01033 207 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 ARR3P36575 388 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 PPP1CAP62136 330 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 JOSD1Q15040 202 aaPredicted RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 ZNF595Q8IYB9 648 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 ZNF799Q96GE5 643 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 P2RX4Q99571 388 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 HDHD3Q9BSH5 251 aaPredicted RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 TMEM208Q9BTX3 173 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 OBP2AQ9NY56 170 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 IGKV1-8A0A0C4DH67 115 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 EIF4E2O60573 245 aaKnown RBP8.11□□□□□ -1.11
SMC6-207ENST00000448223 CTSVO60911 334 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 C1QL1O75973 258 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MT-CO3P00414 261 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 GRPP07492 148 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 EMDP50402 254 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 MRGPREQ86SM8 312 aa8.11□□□□□ -1.11
SMC6-207ENST00000448223 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 LINC01553A4QN01 128 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TNFSF11O14788 317 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 SP1P08047 785 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 VSIG10L2P0DP72 767 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
SMC6-207ENST00000448223 PRDX4Q13162 271 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 SLC25A26Q70HW3 274 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 VASH2Q86V25 355 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 RTL8AQ9BWD3 113 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 UFC1Q9Y3C8 167 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 PTRH2Q9Y3E5 179 aaKnown RBP8.1□□□□□ -1.11
SMC6-207ENST00000448223 TRIOBPQ9H2D6 2365 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 ZDBF2Q9HCK1 2354 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 CXCL10P02778 98 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TYMSP04818 313 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 C17orf67Q0P5P2 114 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TWIST1Q15672 202 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 ANKRD37Q7Z713 158 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 OR4P4Q8NGL7 312 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 EMC6Q9BV81 110 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 S1PR5Q9H228 398 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 COA4Q9NYJ1 87 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 A0A1W2PPV9 198 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TBX6O95947 436 aaPredicted RBP8.1□□□□□ -1.11
SMC6-207ENST00000448223 CEACAM5P06731 702 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 VDAC1P21796 283 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 CD1BP29016 333 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 RND3P61587 244 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 DOLPP1Q86YN1 238 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 OR2K2Q8NGT1 345 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TPSD1Q9BZJ3 242 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 LOC389332A0A1B0GUA5 103 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 EPPINO95925 133 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 SERF2P84101 59 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TFF2Q03403 129 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 PRICKLE4Q2TBC4 344 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 WDR38Q5JTN6 314 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 ZNF841Q6ZN19 808 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 PDPNQ86YL7 162 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 TUBA4BQ9H853 241 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 DAPP1Q9UN19 280 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 SF3B6Q9Y3B4 125 aaKnown RBP8.1□□□□□ -1.11
SMC6-207ENST00000448223 PLXNA4Q9HCM2 1894 aa8.1□□□□□ -1.11
SMC6-207ENST00000448223 ALOX12BO75342 701 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms