RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 TNFRSF4P43489 277 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 DUSP2Q05923 314 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 FBLN7Q53RD9 439 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 ZAR1Q86SH2 424 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 RNASEH2CQ8TDP1 164 aaKnown RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 LRFN3Q9BTN0 628 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 TRAV1-1A0A0B4J248 108 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SUB1P53999 127 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG1-202ENST00000446231 SUMO3P55854 103 aaPredicted RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 TMEM97Q5BJF2 176 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 DLEU1O43261 78 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 WBP1LQ9NX94 342 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 TRBV9A0A0B4J1U6 114 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 STAG3L2P0CL84 134 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 PMELP40967 661 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 KIAA1551Q9HCM1 1747 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CEACAM6P40199 344 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 PRICKLE4Q2TBC4 344 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 PARLQ9H300 379 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 MRPL52Q86TS9 123 aaKnown RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 ASB10Q8WXI3 467 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 OR4C12Q96R67 309 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SRSF4Q08170 494 aaKnown RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 ASCL3Q9NQ33 180 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 ZNF735P0CB33 412 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 DCAF10Q5QP82 559 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 LINC01555Q8NAE3 123 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 S1PR3Q99500 378 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 HDHD3Q9BSH5 251 aaPredicted RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 MYLKQ15746 1914 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 TLN1Q9Y490 2541 aaKnown RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 DSCAML1Q8TD84 2053 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 DPRXA6NFQ7 191 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 C9JQL5 133 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 NUBP1P53384 320 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 FGF22Q9HCT0 170 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 LAMTOR2Q9Y2Q5 125 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 THY1P04216 161 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 TDGF1P3P51864 188 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 KMT5CQ86Y97 462 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 MRPL43Q8N983 215 aaKnown RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 BOD1Q96IK1 185 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 PSMG3Q9BT73 122 aaPredicted RBP6.89□□□□□ -1.31
SMG1-202ENST00000446231 SARGQ9BW04 601 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 NGFRP08138 427 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SLC35B1P78383 322 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 OR8A1Q8NGG7 326 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 RBKSQ9H477 322 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 RPRMQ9NS64 109 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 LIPT2A6NK58 231 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 ZXDAP98168 799 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 SPINK9Q5DT21 86 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 C17orf99Q6UX52 265 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 NDUFS8O00217 210 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 GZMBP10144 247 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 RSG1Q9BU20 258 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 MRPL33O75394 65 aaKnown RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 ZDHHC23Q8IYP9 409 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TMEM170AQ8WVE7 144 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 SELENOHQ8IZQ5 122 aaKnown RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 MRGPRFQ96AM1 343 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 A0A1W2PN81 502 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 H0Y980 276 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 K7EQM0 130 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 DHHO43323 396 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 VENTXO95231 258 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TECTAO75443 2155 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 IGSF23A1L1A6 192 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TFPI2P48307 235 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OR1L3Q8NH93 324 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 LMX1BO60663 402 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OR5AL1P0C617 328 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OTX1P32242 354 aaPredicted RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 RUNX3Q13761 415 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TRAT1Q6PIZ9 186 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OR8B12Q8NGG6 310 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 OR52M1Q8NGK5 317 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 GNRHR2Q96P88 292 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 QTRT1Q9BXR0 403 aaKnown RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 CCL28Q9NRJ3 127 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 ISLRO14498 428 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 MST1LQ2TV78 715 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 C10orf35Q96D05 121 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
SMG1-202ENST00000446231 SNHG12Q9BXW3 62 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 TMEM106BQ9NUM4 274 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 COX7A2P2O60397 106 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 WNT5AP41221 380 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 D2HGDHQ8N465 521 aa6.88□□□□□ -1.31
SMG1-202ENST00000446231 NPBWR2P48146 333 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms