RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PDE6DO43924 150 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 VENTXO95231 258 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 GPR3P46089 330 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 RBX1P62877 108 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 VHLLQ6RSH7 139 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DL5AQ8N109 375 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CPEB3Q8NE35 698 aaKnown RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 TMEM56Q96MV1 263 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TMEM56-RWDD3S4R434 201 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 LRP5LA4QPB2 252 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 H3BML4 177 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 TOX4O94842 621 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 EIF3IQ13347 325 aaKnown RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 FNDC7Q5VTL7 733 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 A0A1B0GUS0 222 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 ANGPTL7O43827 346 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PDCD6O75340 191 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SYNGR4O95473 234 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PPYP01298 95 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 UCP3P55916 312 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 RAB31Q13636 194 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SSPNQ14714 243 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 OR8B8Q15620 311 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 RNASE8Q8TDE3 154 aaKnown RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 ZPBPQ9BS86 351 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 GPR35Q9HC97 309 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 MT-CO2P00403 227 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 CRYAAP02489 173 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 C2orf27AQ580R0 203 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 FAM122AQ96E09 287 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 OXGR1Q96P68 337 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 ST3GAL6Q9Y274 331 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 IER3P46695 156 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SOX8P57073 446 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 A0A1W2PPV4 95 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 LILRB3O75022 631 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SRSF10O75494 262 aaKnown RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 FAM90A2PQ658T7 463 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 CCL4L1Q8NHW4 92 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 RBM24Q9BX46 236 aaKnown RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 PCNX2A6NKB5 2137 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SPRY1O43609 319 aaPredicted RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 NTF3P20783 257 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 TMEM147Q9BVK8 224 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 MRPS16Q9Y3D3 137 aaKnown RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 APCSP02743 223 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 TYMSP04818 313 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 IL6RP08887 468 aaPredicted RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 TDGF1P13385 188 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PMCHP20382 165 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 ALKBH3Q96Q83 286 aaPredicted RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 SHBQ15464 509 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 NUDT11Q96G61 164 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 LOC285556D6RIA3 1793 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 TUSC2O75896 110 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PRDX4Q13162 271 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 RTP5Q14D33 572 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 CLEC2AQ6UVW9 174 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 RNF144BQ7Z419 303 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SLC7A10Q9NS82 523 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 IGHMP01871 453 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 SPSB1Q96BD6 273 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 NAT8BQ9UHF3 227 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 HCFC2Q9Y5Z7 792 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 PAGE4O60829 102 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 ZNF542PQ5EBM4 170 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 THAP3Q8WTV1 239 aaPredicted RBP4.35□□□□□ -1.71
HERC1-201ENST00000443617 RNF24Q9Y225 148 aa4.35□□□□□ -1.71
HERC1-201ENST00000443617 A0A1W2PN81 502 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 A0A1W2PR80 420 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 EML2O95834 649 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 IL18BPO95998 194 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 D2HGDHQ8N465 521 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 BORCS8Q96FH0 119 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 GMPPAQ96IJ6 420 aaPredicted RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 TCF20Q9UGU0 1960 aaKnown RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 TRAV9-2A0A087WT02 112 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 K7ERU9 68 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 HNRNPA1P09651 372 aaKnown RBP eCLIP4.34□□□□□ -1.71
HERC1-201ENST00000443617 C9orf50Q5SZB4 431 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 LILRA6Q6PI73 481 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 OR10P1Q8NGE3 313 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 TTC28Q96AY4 2481 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 ETV2O00321 342 aaPredicted RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 RAB30Q15771 203 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PIGYQ3MUY2 71 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PET117Q6UWS5 81 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 STPG4Q8N801 248 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PPIAL4AQ9Y536 164 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 CTXND1A0A1B0GTU2 59 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 KIAA1324LA8MWY0 1029 aaPredicted RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 M0R1X1 148 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 FBLN7Q53RD9 439 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 FRMPD3Q5JV73 1810 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms