RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 PITX1P78337 314 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 PSG9Q00887 426 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 EIF4EBP2Q13542 120 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 EXOSC7Q15024 291 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 SHBQ15464 509 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FRG2Q64ET8 278 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TCTN3Q6NUS6 607 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PLXDC2Q6UX71 529 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TEX43Q6ZNM6 134 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 WDR5BQ86VZ2 330 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC35F2Q8IXU6 374 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TMEM256Q8N2U0 113 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NOXO1Q8NFA2 376 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 OR52E5Q8NH55 327 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 RAB1CQ92928 201 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SARAFQ96BY9 339 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ZNF764Q96H86 408 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 LMLNQ96KR4 655 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 LINC00615Q96LM1 132 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 FRG2BQ96QU4 278 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A51Q9H1U9 297 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FNDC4Q9H6D8 234 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 BPIFA1Q9NP55 256 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 MANBALQ9NQG1 85 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ELOVL5Q9NYP7 299 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 KLHL13Q9P2N7 655 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SMPXQ9UHP9 88 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 RCL1Q9Y2P8 373 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 TSSC4Q9Y5U2 329 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 ARL2-SNX15V9GYD0 113 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NF1P21359 2839 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SCN1AP35498 2009 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 DSPPQ9NZW4 1301 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FITM1A5D6W6 292 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 H0Y980 276 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 WNT11O96014 354 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GAPDHP04406 335 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 HSPB1P04792 205 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 FGF1P05230 155 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GYPBP06028 91 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SERPINE2P07093 398 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SRP19P09132 144 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 DBHP09172 617 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 DANCRP0C864 163 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 IGLC2P0DOY2 106 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 IGLC3P0DOY3 106 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 PI3P19957 117 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MC4RP32245 332 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SGSHP51688 502 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 PPP1CBP62140 327 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GNB2P62879 340 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SIRPAP78324 504 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CSNK1G2P78368 415 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CCL7P80098 99 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 PSG6Q00889 435 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 ANKRD55Q3KP44 614 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 ALG10Q5BKT4 473 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 LRRC10Q5BKY1 277 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TRAT1Q6PIZ9 186 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TMEM156Q8N614 296 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OR10P1Q8NGE3 313 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OR4K13Q8NH42 304 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 OR5B3Q8NH48 314 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MARCH1Q8TCQ1 289 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 DOK4Q8TEW6 326 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SMIM19Q96E16 107 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 RBMXL1Q96E39 390 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 MRPS18AQ9NVS2 196 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 WSB2Q9NYS7 404 aaPredicted RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 PLEK2Q9NYT0 353 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 LHX3Q9UBR4 397 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CKLFQ9UBR5 152 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SIGLEC7Q9Y286 467 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TMED7Q9Y3B3 224 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 B3GALT1Q9Y5Z6 326 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 RFNGQ9Y644 331 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 LOC285556D6RIA3 1793 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 ARID2Q68CP9 1835 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 A0A0G2JMM0 328 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 A0A1W2PPB8 328 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GAGE12HA6NDE8 117 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 KIR3DP1A8MWS1 328 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 SHISA8B8ZZ34 492 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 FAM157AC9JC47 383 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 H0YIZ8 118 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 M0R2Z0 102 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 XRCC2O43543 280 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 ENSAO43768 121 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 RCBTB2O95199 551 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 TGFAP01135 160 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 DBIP07108 87 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 CSRP1P21291 193 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 F2RP25116 425 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 BSGP35613 385 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 CDKN1AP38936 164 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MDH2P40926 338 aaKnown RBP2.42□□□□□ -2.02
LIG4-203ENST00000442234 GPR1P46091 355 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 GPR12P47775 334 aa2.42□□□□□ -2.02
LIG4-203ENST00000442234 MANFP55145 182 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms