RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SS18L1O75177 396 aaPredicted RBP14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 SERPINE2P07093 398 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 SRP19P09132 144 aaKnown RBP14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 TDGF1P13385 188 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 ARR3P36575 388 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 RDH5Q92781 318 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 APH1AQ96BI3 265 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF407Q9C0G0 2248 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 CELSR3Q9NYQ7 3312 aa14.08□□□□□ -0.16
SEMA3B-207ENST00000441915 ANKRD30BLA7E2S9 258 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 NEURL1O76050 574 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 DFFBO76075 338 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 HBE1P02100 147 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 PAX9P55771 341 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF573Q86YE8 665 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 C1QL4Q86Z23 238 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 OR5P3Q8WZ94 311 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 POM121L2Q96KW2 1035 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 HSPB1P04792 205 aaKnown RBP14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 TAS2R30P59541 319 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 RPL23AP62750 156 aaKnown RBP14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 SLC25A24Q6NUK1 477 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 DPPA3Q6W0C5 159 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 DMRTC2Q8IXT2 367 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 OR51H1Q8NH63 302 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF488Q96MN9 340 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 TOLLIPQ9H0E2 274 aa14.07□□□□□ -0.16
SEMA3B-207ENST00000441915 TRBV6-6A0A0A6YYG2 114 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 A0A1B0GU03 582 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 TAGLN2P37802 199 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 UBE2KP61086 200 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ABHD17BQ5VST6 288 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 HEPN1Q6WQI6 88 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 RNASE11Q8TAA1 199 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 RAB39BQ96DA2 213 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 C14orf144Q96I85 54 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 MPC1Q9Y5U8 109 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 WSB1Q9Y6I7 421 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 GNG3P63215 75 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 HLA-DRB3P79483 266 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF324BQ6AW86 544 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 SP5Q6BEB4 398 aaPredicted RBP14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 FAM58AQ8N1B3 248 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 MUCL1Q96DR8 90 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 YPEL4Q96NS1 127 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ZPBPQ9BS86 351 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 HIPK2Q9H2X6 1198 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 TRAV24A0A0B4J272 114 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 A0A0G2JRQ6 117 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 OR5B21A6NL26 309 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 H3BP45 60 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 IFNA5P01569 189 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 SLC25A6P12236 298 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ACP1P24666 158 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ICAM4Q14773 271 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF506Q5JVG8 444 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 CYB561D1Q8N8Q1 229 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 IL1F10Q8WWZ1 152 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 GPR146Q96CH1 333 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 RAB40CQ96S21 281 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
SEMA3B-207ENST00000441915 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 FAM166BA8MTA8 275 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 CNOT4O95628 575 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 PSG2P11465 335 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 MAGEA5P43359 124 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 RPS10P46783 165 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 RNPS1Q15287 305 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 H1FOOQ8IZA3 346 aaPredicted RBP14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 CLDND2Q8NHS1 167 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 HES7Q9BYE0 225 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 PCSK5Q92824 1860 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 A0A087WWC5 75 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 H0YL77 283 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 APLNRP35414 380 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 DLK1P80370 383 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 THNSL2Q86YJ6 484 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 C17orf78Q8N4C9 275 aa14.05□□□□□ -0.16
SEMA3B-207ENST00000441915 DNAJC13O75165 2243 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 SLC31A2O15432 143 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 SPINK2P20155 84 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 KHDC3LQ587J8 217 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 NCMAPQ5T1S8 102 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF880Q6PDB4 577 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 TVP23CQ96ET8 276 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 CABLES2Q9BTV7 478 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 TTTY12Q9BZ98 90 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 AHCTF1Q8WYP5 2266 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 LRP5LA4QPB2 252 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 ZNF727A8MUV8 499 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 DEGS1O15121 323 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 JMJD7P0C870 316 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 TAS2R60P59551 318 aa14.04□□□□□ -0.16
SEMA3B-207ENST00000441915 ZXDAP98168 799 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms