RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 WFDC1Q9HC57 220 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 DOK5Q9P104 306 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 MSTNO14793 375 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 DUSP1P28562 367 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 GTF3AQ92664 365 aaKnown RBP12.09□□□□□ -0.47
LIMD1-202ENST00000440097 MRPL24Q96A35 216 aaKnown RBP12.09□□□□□ -0.47
LIMD1-202ENST00000440097 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
LIMD1-202ENST00000440097 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 ANXA10Q9UJ72 324 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 C14orf166Q9Y224 244 aaKnown RBP12.09□□□□□ -0.47
LIMD1-202ENST00000440097 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 IGHV3-64DA0A0J9YX35 117 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 PDCD6O75340 191 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 CEACAM4O75871 244 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 KIR2DL2P43627 348 aaPredicted RBP12.08□□□□□ -0.48
LIMD1-202ENST00000440097 GGNBP1Q5YKI7 109 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 OR10D4PQ8NGN7 298 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 OR2J1Q9GZK6 312 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 TUBD1Q9UJT1 453 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF727A8MUV8 499 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 AGFG2O95081 481 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
LIMD1-202ENST00000440097 ACSF3Q4G176 576 aaPredicted RBP12.08□□□□□ -0.48
LIMD1-202ENST00000440097 MKXQ8IYA7 352 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 TOMM40LQ969M1 308 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 MUCL1Q96DR8 90 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 GFOD1Q9NXC2 390 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 IL36GQ9NZH8 169 aa12.08□□□□□ -0.48
LIMD1-202ENST00000440097 INTS1Q8N201 2190 aaKnown RBP12.08□□□□□ -0.48
LIMD1-202ENST00000440097 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 GFRA3O60609 400 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 FUT3P21217 361 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 ERVS71-1P61550 626 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 IGFBP7Q16270 282 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF674Q2M3X9 581 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SOHLH1Q5JUK2 328 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SLC22A25Q6T423 547 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 OR5A2Q8NGI9 324 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 RARRES2Q99969 163 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
LIMD1-202ENST00000440097 PLEKHA2Q9HB19 425 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 PRR14LQ5THK1 2151 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SYNGR1O43759 233 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 CA11O75493 328 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 FXYD4P59646 89 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 PPP1CBP62140 327 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 GABRA6Q16445 453 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SPNS3Q6ZMD2 512 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 SUMF2Q8NBJ7 301 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 MEGF10Q96KG7 1140 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 GINS3Q9BRX5 216 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 IL36RNQ9UBH0 155 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 BORCS7-ASMTA0A0B4J1R7 106 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 IFNA21P01568 189 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 NHLH1Q02575 133 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 HSD17B11Q8NBQ5 300 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 MTCH1Q9NZJ7 389 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
LIMD1-202ENST00000440097 PCNX1Q96RV3 2341 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 AHRRA9YTQ3 701 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 P2RY1P47900 373 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 GNG3P63215 75 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 DMRTC2Q8IXT2 367 aaPredicted RBP12.06□□□□□ -0.48
LIMD1-202ENST00000440097 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
LIMD1-202ENST00000440097 PTPRQQ9UMZ3 2332 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 K7EM74 188 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
LIMD1-202ENST00000440097 CXCL1P09341 107 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
LIMD1-202ENST00000440097 LMO1P25800 156 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 GFI1BQ5VTD9 330 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF573Q86YE8 665 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF610Q8N9Z0 462 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 PROCRQ9UNN8 238 aa12.06□□□□□ -0.48
LIMD1-202ENST00000440097 E5RGE8 158 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 SMPD2O60906 423 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms