RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PKIBQ9C010 78 aa4.04□□□□□ -1.76
EDEM3-203ENST00000439962 WNT5BQ9H1J7 359 aa4.04□□□□□ -1.76
EDEM3-203ENST00000439962 BANF2Q9H503 90 aa4.04□□□□□ -1.76
EDEM3-203ENST00000439962 METTL8Q9H825 291 aaKnown RBP4.04□□□□□ -1.76
EDEM3-203ENST00000439962 ZMAT3Q9HA38 289 aaKnown RBP4.04□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF230Q9UIE0 474 aaPredicted RBP4.04□□□□□ -1.76
EDEM3-203ENST00000439962 GPR160Q9UJ42 338 aa4.04□□□□□ -1.76
EDEM3-203ENST00000439962 STARD10Q9Y365 291 aa4.04□□□□□ -1.76
EDEM3-203ENST00000439962 BORCS7-ASMTA0A0B4J1R7 106 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 PQLC2LA1A4F0 135 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 C5orf49A4QMS7 147 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR5B21A6NL26 309 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 E7EQL1 145 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 F5H5K5 113 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TRIM77I1YAP6 450 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 GPR137BO60478 399 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SCAF4O95104 1147 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 FAM157CP0CG43 387 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF728P0DKX0 622 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR5H8P0DN80 308 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM225BP0DP42 221 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SERPINA2P20848 420 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 DUSP1P28562 367 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 MDH2P40926 338 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CAV2P51636 162 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 F2RL1P55085 397 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 PSG4Q00888 419 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SRSF2Q01130 221 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 FLI1Q01543 452 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 DEFB113Q30KQ7 82 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 ANKRD55Q3KP44 614 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 FBXL19-AS1Q494R0 122 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 DPPA3Q6W0C5 159 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 LIAT1Q6ZQX7 453 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 MOB1BQ7L9L4 216 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 C1orf174Q8IYL3 243 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 WDR31Q8NA23 367 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR5A2Q8NGI9 324 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR1K1Q8NGR3 316 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 LILRB1Q8NHL6 650 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CASTOR1Q8WTX7 329 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 NANOS1Q8WY41 292 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 C14orf79Q96F83 325 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 REPIN1Q9BWE0 567 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 NKX6-2Q9C056 277 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 NGBQ9NPG2 151 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 PURGQ9UJV8 347 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 MPC1Q9Y5U8 109 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SLC25A15Q9Y619 301 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 IGHV1-18A0A0C4DH31 117 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 BTBD17A6NE02 478 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 K7EPK0 472 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CNOT4O95628 575 aaKnown RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CSN2P05814 226 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 DBHP09172 617 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR4A8P0C604 315 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 HKR1P10072 659 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SELEP16581 610 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF32P17041 273 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 HTR5AP47898 357 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 NPY4RP50391 375 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 FGF12P61328 243 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CCL8P80075 99 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM187Q14656 261 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 OR8G1Q15617 311 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 GUCA2BQ16661 112 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 SNAI3Q3KNW1 292 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TIMM23BQ5SRD1 257 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 DHRS7BQ6IAN0 325 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 C17orf107Q6ZR85 190 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CLRN3Q8NCR9 226 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM56Q96MV1 263 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 GINS3Q9BRX5 216 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF2Q9BSG1 426 aaPredicted RBP4.03□□□□□ -1.76
EDEM3-203ENST00000439962 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 CHODLQ9H9P2 273 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 AK3Q9UIJ7 227 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 PCDHB10Q9UN67 800 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 MMP24Q9Y5R2 645 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM56-RWDD3S4R434 201 aa4.03□□□□□ -1.76
EDEM3-203ENST00000439962 C13orf42A0A1B0GVH6 325 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 FAM25EA8MYX2 175 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 SHISA9B4DS77 424 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 H0YIZ8 118 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 CCSO14618 274 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 TOR1AO14656 332 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 HTR3BO95264 441 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 MBPP02686 304 aaPredicted RBP4.02□□□□□ -1.77
EDEM3-203ENST00000439962 LCATP04180 440 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 SLC2A1P11166 492 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 S100GP29377 79 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 APLNRP35414 380 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF92Q03936 586 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 BAXQ07812 192 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 CEACAM21Q3KPI0 293 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
EDEM3-203ENST00000439962 NCMAPQ5T1S8 102 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms