RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 NPIPB7O75200 414 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 PPBPP02775 128 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 TK1P04183 234 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 EFNA3P52797 238 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 PLCXD3Q63HM9 321 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 Q6ZVH6 145 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 GAPTQ8N292 157 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 ST6GALNAC3Q8NDV1 305 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 BCL2L2Q92843 193 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-209ENST00000439886 SLC25A22Q9H936 323 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 PRSS50Q9UI38 385 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 NPIPA3F8WFD2 350 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TNFRSF10CO14798 259 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 DHRS3O75911 302 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 PPYP01298 95 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 POU2F2P09086 479 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 EGR1P18146 543 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 PRSS8Q16651 343 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM41BQ5BJD5 291 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF506Q5JVG8 444 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 RHBDD1Q8TEB9 315 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 SLC35E1Q96K37 410 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 KCNS2Q9ULS6 477 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 LIPT2A6NK58 231 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 CEACAM18A8MTB9 384 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TRDCB7Z8K6 153 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 IFNA1P01562 189 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 CA3P07451 260 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 IGLV3-21P80748 117 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-209ENST00000439886 BSXQ3C1V8 233 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 MS4A10Q96PG2 267 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 A0A087WWC5 75 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 MAP1LC3B2A6NCE7 125 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF814B7Z6K7 855 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF737O75373 536 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 PDGFBP01127 241 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-209ENST00000439886 OR5G3P0C626 314 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 BCL2P10415 239 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 RABIFP47224 123 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 VWA1Q6PCB0 445 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 GJC3Q8NFK1 279 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 MSI2Q96DH6 328 aaKnown RBP10.11□□□□□ -0.79
SMPD4-209ENST00000439886 LYZL4Q96KX0 146 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
SMPD4-209ENST00000439886 MAP1LC3BQ9GZQ8 125 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 RBKSQ9H477 322 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 ALKBH4Q9NXW9 302 aa10.11□□□□□ -0.79
SMPD4-209ENST00000439886 TRAV39A0A0B4J263 110 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 K7EP13 123 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 PITX3O75364 302 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 VEGFBP49765 207 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF92Q03936 586 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 SNAI3Q3KNW1 292 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 SLC25A26Q70HW3 274 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 CALHM1Q8IU99 346 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 TRAV34A0A0B4J273 112 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 UBE2L5PA0A1B0GUS4 154 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 LOC102723971A0A1B0GUV8 181 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 CD300LBA8K4G0 201 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 FGF5P12034 268 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 UBE2V1Q13404 147 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 C9orf135Q5VTT2 229 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 RAET1LQ5VY80 246 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 ERASQ7Z444 233 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 SPTSSAQ969W0 71 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 FAM103A1Q9BTL3 118 aaKnown RBP10.1□□□□□ -0.79
SMPD4-209ENST00000439886 OR51I2Q9H344 312 aa10.1□□□□□ -0.79
SMPD4-209ENST00000439886 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 PRRX1P54821 245 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF468Q5VIY5 522 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-209ENST00000439886 OSR2Q8N2R0 312 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 FAM89BQ8N5H3 189 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 ULBP2Q9BZM5 246 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
SMPD4-209ENST00000439886 SMDT1Q9H4I9 107 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 Q9N2K0 584 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 IGHV3-64DA0A0J9YX35 117 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 A0A1B0GU03 582 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 S100GP29377 79 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 BLKP51451 505 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 OR1D5P58170 312 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 PRR27Q6MZM9 219 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 MCEMP1Q8IX19 187 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 ATP5SQ99766 215 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 FBLN5Q9UBX5 448 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 GRIFINA4D1Z8 144 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 LRRC3CA6NJW4 275 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM50AO95807 157 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 IGKV3-11P04433 115 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 CEACAM1P13688 526 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 MSR1P21757 451 aa10.09□□□□□ -0.79
SMPD4-209ENST00000439886 TAS2R30P59541 319 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms