RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 BRICD5Q6PL45 260 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 C6orf201Q7Z4U5 140 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 RTN4RL2Q86UN3 420 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 C3orf56Q8N813 242 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 PLPPR1Q8TBJ4 325 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 KIF25Q9UIL4 384 aa14.4□□□□□ -0.1
CCDC188-201ENST00000439765 UBE2J1Q9Y385 318 aaPredicted RBP14.4□□□□□ -0.1
CCDC188-201ENST00000439765 TPPPO94811 219 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 HLA-DQB1P01920 261 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 RBP4P02753 201 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 MELTFP08582 738 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 HIST1H1DP16402 221 aaKnown RBP14.39□□□□□ -0.11
CCDC188-201ENST00000439765 GNB3P16520 340 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 MNDAP41218 407 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 TAS2R20P59543 309 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 LSAMPQ13449 338 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 MADCAM1Q13477 382 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 ARL6IP1Q15041 203 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 AWAT1Q58HT5 328 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 SPANXN2Q5MJ10 180 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 PRAMEF5Q5TYX0 476 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 NEK7Q8TDX7 302 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 C17orf50Q8WW18 174 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 HEXA-AS1Q9H8Q6 139 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 RABL2AQ9UBK7 228 aaPredicted RBP14.39□□□□□ -0.11
CCDC188-201ENST00000439765 RABL2BQ9UNT1 228 aa14.39□□□□□ -0.11
CCDC188-201ENST00000439765 MRPS7Q9Y2R9 242 aaKnown RBP14.39□□□□□ -0.11
CCDC188-201ENST00000439765 MEIKINA0A087WXM9 373 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 MCRIP1C9JLW8 97 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 MFNGO00587 321 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 MMP23AO75900 390 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 GSTP1P09211 210 aaKnown RBP14.38□□□□□ -0.11
CCDC188-201ENST00000439765 FBP1P09467 338 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 OMGP23515 440 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 RBM39Q14498 530 aaKnown RBP14.38□□□□□ -0.11
CCDC188-201ENST00000439765 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 Q6YL49 198 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 CYYR1Q96J86 154 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 SULT4A1Q9BR01 284 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 FAAP24Q9BTP7 215 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 GAL3ST2Q9H3Q3 398 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 PRDM13Q9H4Q3 707 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 AUNIPQ9H7T9 357 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCDC188-201ENST00000439765 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 V9GYH0 126 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 FAM172BPA6NC97 362 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 CLDN34H7C241 214 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 HKR1P10072 659 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 PAX6P26367 422 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 PTBP1P26599 531 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCDC188-201ENST00000439765 IL18Q14116 193 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 RSBN1Q5VWQ0 802 aaPredicted RBP14.38□□□□□ -0.11
CCDC188-201ENST00000439765 OLFML2AQ68BL7 652 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 PYHIN1Q6K0P9 492 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 FAM131AQ6UXB0 335 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 OR13A1Q8NGR1 328 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 ABHD1Q96SE0 405 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 AKIP1Q9NQ31 210 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 OR6C3Q9NZP0 311 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 ZNRD1Q9P1U0 126 aa14.38□□□□□ -0.11
CCDC188-201ENST00000439765 TRAV39A0A0B4J263 110 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 UBE2QL1A1L167 161 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 IGHV4-59P01825 116 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 ARG1P05089 322 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 KCNJ3P48549 501 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 ZNF45Q02386 682 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 FOXL1Q12952 345 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 PNLIPRP3Q17RR3 467 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 MIDNQ504T8 468 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 MFSD4AQ8N468 514 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 OR13D1Q8NGV5 346 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 MRGPRDQ8TDS7 321 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 C15orf40Q8WUR7 153 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 SSMEM1Q8WWF3 244 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 S100ZQ8WXG8 99 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 ELF5Q9UKW6 265 aaPredicted RBP14.37□□□□□ -0.11
CCDC188-201ENST00000439765 SESN1Q9Y6P5 492 aa14.37□□□□□ -0.11
CCDC188-201ENST00000439765 TMEM235A6NFC5 223 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 SERPINE3A8MV23 424 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 RNASE1P07998 156 aaKnown RBP14.36□□□□□ -0.11
CCDC188-201ENST00000439765 PTHLHP12272 177 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 GDNFP39905 211 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 PITPNAQ00169 270 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 HACD4Q5VWC8 232 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 LDLRAD3Q86YD5 345 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 SNX29P2Q8IUI4 249 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 CORO2AQ92828 525 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 CHIAQ9BZP6 476 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 TAS2R3Q9NYW6 316 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 AK3Q9UIJ7 227 aa14.36□□□□□ -0.11
CCDC188-201ENST00000439765 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 TMEM30CPA0ZSE6 113 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 ODF3BA8MYP8 253 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 CA11O75493 328 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 PRSS3P35030 304 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 SSTR5P35346 364 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 LGALS4P56470 323 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 PAX5Q02548 391 aa14.35□□□□□ -0.11
CCDC188-201ENST00000439765 ZNF79Q15937 498 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms