RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 M0R143 59 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 GZMBP10144 247 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 CCL3P10147 92 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 RAB4BP61018 213 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 SLC38A11Q08AI6 406 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 EIF3IQ13347 325 aaKnown RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 CFHR5Q9BXR6 569 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 AKIRIN1Q9H9L7 192 aaPredicted RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 TRAPPC1Q9Y5R8 145 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 SLC22A20A6NK97 555 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 CA11O75493 328 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 VAMP5O95183 116 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 CST2P09228 141 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 SPCS3P61009 180 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 TGFBR3Q03167 851 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 JOSD1Q15040 202 aaPredicted RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 LTC4SQ16873 150 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 ZNF468Q5VIY5 522 aaPredicted RBP7.79□□□□□ -1.16
COPB1-202ENST00000439561 TMEM211Q6ICI0 200 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 MRGPRGQ86SM5 289 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
COPB1-202ENST00000439561 IGHV1OR15-9A0A0B4J2B8 117 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 IFNL4K9M1U5 179 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 SIRPB1O00241 398 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 PAGE4O60829 102 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 PIAS2O75928 621 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 DEFA4P12838 97 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 CD33P20138 364 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 CFHR1Q03591 330 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 ZNF816Q0VGE8 651 aaPredicted RBP7.78□□□□□ -1.16
COPB1-202ENST00000439561 FOXO1Q12778 655 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
COPB1-202ENST00000439561 OR10V1Q8NGI7 309 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 OR4C12Q96R67 309 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 RAB40CQ96S21 281 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 TMEM204Q9BSN7 226 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 FAM103A1Q9BTL3 118 aaKnown RBP7.78□□□□□ -1.16
COPB1-202ENST00000439561 NDUFAF3Q9BU61 184 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 PAM16Q9Y3D7 125 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 A0A0J9YW62 118 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 A0A1W2PPV4 95 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 P04436 131 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 OR4A8P0C604 315 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 PLA2G5P39877 138 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 PSG4Q00888 419 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
COPB1-202ENST00000439561 FAM90A2PQ658T7 463 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 LRTM2Q8N967 370 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 OR2V1Q8NHB1 315 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 CLDN23Q96B33 292 aa7.78□□□□□ -1.16
COPB1-202ENST00000439561 NOL4LQ96MY1 436 aaPredicted RBP7.78□□□□□ -1.16
COPB1-202ENST00000439561 RPL36A-HNRNPH2H7BZ11 118 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 SPINK4O60575 86 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 PGLYRP1O75594 196 aaPredicted RBP7.77□□□□□ -1.16
COPB1-202ENST00000439561 GLB1P16278 677 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 F2RP25116 425 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 UCP2P55851 309 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 PRDX4Q13162 271 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 SPATA46Q5T0L3 261 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 RHBDD2Q6NTF9 364 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 BAGE3Q86Y29 109 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 BAGE2Q86Y30 109 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 PARLQ9H300 379 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 PARD6AQ9NPB6 346 aa7.77□□□□□ -1.16
COPB1-202ENST00000439561 CISD1Q9NZ45 108 aaKnown RBP7.77□□□□□ -1.16
COPB1-202ENST00000439561 DVL1O14640 695 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 GYPAP02724 150 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 OTX2P32243 289 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 WNT5AP41221 380 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 PCBD1P61457 104 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 OR10G4Q8NGN3 311 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 OR10G9Q8NGN4 311 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 OR10G7Q8NGN6 311 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 GATAD1Q8WUU5 269 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 TBX15Q96SF7 602 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 CTDSP1Q9GZU7 261 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 FAM234AQ9H0X4 552 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 ZDHHC11Q9H8X9 412 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 A0A0G2JRQ6 117 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 GRIFINA4D1Z8 144 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 A6NNC1 897 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 SSR4P51571 173 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 UCP3P55916 312 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 CD81P60033 236 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 FAM27BQ5VT28 67 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 ZDHHC23Q8IYP9 409 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 C10orf35Q96D05 121 aa7.77□□□□□ -1.17
COPB1-202ENST00000439561 RYDENQ9NUL5 291 aaKnown RBP7.77□□□□□ -1.17
COPB1-202ENST00000439561 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 MDFIC2A0A1B0GVS7 189 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 A0A1B0GW64 132 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 OR6C6A6NF89 314 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 FOXI3A8MTJ6 420 aaPredicted RBP7.76□□□□□ -1.17
COPB1-202ENST00000439561 DEGS1O15121 323 aa7.76□□□□□ -1.17
COPB1-202ENST00000439561 GDF9O60383 454 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms