RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TMEM252Q8N6L7 170 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 BCO1Q9HAY6 547 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SLC7A10Q9NS82 523 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGHV1-45A0A0A0MS14 117 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 H7BYZ3 331 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SRP19P09132 144 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 COX6A1P12074 109 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 GPM6AP51674 278 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 FOXG1P55316 489 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 RAB4BP61018 213 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SSTP61278 116 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 QRFPP83859 136 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF92Q03936 586 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ENDOGQ14249 297 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 MRPL21Q7Z2W9 205 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR2Y1Q8NGV0 311 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR1F12Q8NHA8 337 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SLC25A31Q9H0C2 315 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SERPINE2P07093 398 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 HLA-GP17693 338 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 TAS2R60P59551 318 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 VAX1Q5SQQ9 334 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ATP1A1-AS1Q5TC04 95 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 DHRS13Q6UX07 377 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 Q6ZVH6 145 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 LHX4Q969G2 390 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SYT3Q9BQG1 590 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF286AQ9HBT8 521 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 BOD1L1Q8NFC6 3051 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 PTBP3O95758 552 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGHMP01871 453 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 SCTP09683 121 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 MALLQ13021 153 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ICAM4Q14773 271 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 EXT1Q16394 746 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 C16orf82Q7Z2V1 217 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 RPRMQ9NS64 109 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 PILRBQ9UKJ0 227 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 AQP7O14520 342 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 KLF7O75840 302 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 FOLR2P14207 255 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 NTF4P34130 210 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 PSG4Q00888 419 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF266Q14584 549 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 TCF23Q7RTU1 214 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZDHHC23Q8IYP9 409 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF808Q8N4W9 903 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR56B2PQ8NGI1 322 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR4X1Q8NH49 305 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 MOB1AQ9H8S9 216 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 PCNX2A6NKB5 2137 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 ATG2AQ2TAZ0 1938 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 C3orf85A0A1B0GTC6 90 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 CLDN34H7C241 214 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 SIRPB1O00241 398 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 TCF21O43680 179 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 TUSC2O75896 110 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 CLDN1O95832 211 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 AMBPP02760 352 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 SEC11BP0C7V7 166 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 THBS3P49746 956 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 RAB1AP62820 205 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 RAC1P63000 192 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 TUSC5Q8IXB3 177 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 GCNT2Q8N0V5 402 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 CHRNA10Q9GZZ6 450 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 RBKSQ9H477 322 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 MYOZ1Q9NP98 299 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 TCFL5Q9UL49 500 aa8.55□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGLV3-12A0A075B6K2 115 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 LY6G6EA0A0G2JKS1 128 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF320A2RRD8 509 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 CRYM-AS1A6NIL9 109 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM50AO95807 157 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 PRB4P10163 310 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 TBPP20226 339 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 FGF7P21781 194 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 HOXA4Q00056 320 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR5I1Q13606 314 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAM78BQ5VT40 261 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR13D1Q8NGV5 346 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 CT55Q8WUE5 264 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 C1orf147Q96MC9 270 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 IMMP2LQ96T52 175 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 PCED1AQ9H1Q7 454 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 SLC39A9Q9NUM3 307 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 RNF24Q9Y225 148 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 U3KQA8 63 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 PINLYPA6NC86 204 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 TGOLN2O43493 480 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 SYNGR4O95473 234 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms