RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SMIM7Q9BQ49 75 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 SFT2D2O95562 160 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ZNF137PP52743 207 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 OR4X1Q8NH49 305 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 WDYHV1Q96HA8 205 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 METTL26Q96S19 204 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 NTN3O00634 580 aaPredicted RBP10.44□□□□□ -0.74
NEK1-201ENST00000439128 GLRXP35754 106 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 GGNBP1Q5YKI7 109 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ZDHHC22Q8N966 263 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
NEK1-201ENST00000439128 ELOVL1Q9BW60 279 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ZDBF2Q9HCK1 2354 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 SNRPGP15A8MWD9 76 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 CECR9P0C854 216 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ZNF708P17019 499 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 RNASEK-C17orf49H0YIS7 233 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 S100A8P05109 93 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ZNF561Q8N587 486 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 YIPF6Q96EC8 236 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 ABHD14BQ96IU4 210 aa10.44□□□□□ -0.74
NEK1-201ENST00000439128 FAM24AA6NFZ4 105 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 HIST1H1EP10412 219 aaKnown RBP10.43□□□□□ -0.74
NEK1-201ENST00000439128 GABRB1P18505 474 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 FCER1GP30273 86 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 NCR3LG1Q68D85 454 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 C17orf51A8MQB3 221 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 PPYP01298 95 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 ASAH1Q13510 395 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 RIPPLY2Q5TAB7 128 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 OR4A5Q8NH83 315 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 IMMP1LQ96LU5 166 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 TTRP02766 147 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.745e-8■■■■■ 34.7
NEK1-201ENST00000439128 SNAI3Q3KNW1 292 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 OR5C1Q8NGR4 320 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 LEAP2Q969E1 77 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 CALYQ9NYX4 217 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 IGKV3-11P04433 115 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 HLA-GP17693 338 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 ENDOGQ14249 297 aaKnown RBP10.43□□□□□ -0.74
NEK1-201ENST00000439128 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
NEK1-201ENST00000439128 OR52M1Q8NGK5 317 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 MARC2Q969Z3 335 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 GP6Q9HCN6 339 aa10.43□□□□□ -0.74
NEK1-201ENST00000439128 A0A0U1RQV5 110 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 PTP4A3O75365 173 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 ORM1P02763 201 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 TRAPPC2P0DI81 140 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 TRAPPC2BP0DI82 140 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MMP16P51512 607 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 IL13RA2Q14627 380 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 CLEC12BQ2HXU8 276 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 RAX2Q96IS3 184 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 RNF2Q99496 336 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MRPL22Q9NWU5 206 aaKnown RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 IGLV3-21P80748 117 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 OXA1LQ15070 435 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 C10orf113Q5VZT2 155 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 SSMEM1Q8WWF3 244 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MRGPRFQ96AM1 343 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 LOC285556D6RIA3 1793 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 NTF3P20783 257 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 ZBTB34Q8NCN2 500 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 DDB2Q92466 427 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 WNT5BQ9H1J7 359 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 NPAP1Q9NZP6 1156 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 KLHDC2Q9Y2U9 406 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 NPIPB8E9PQR5 432 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 TCAPO15273 167 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 THY1P04216 161 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MGPP08493 103 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 MYPOPQ86VE0 399 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 CALHM1Q8IU99 346 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 OR1L6Q8NGR2 347 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 HDHD3Q9BSH5 251 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 FGF12P61328 243 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 DMKNQ6E0U4 476 aaPredicted RBP10.42□□□□□ -0.74
NEK1-201ENST00000439128 OVCH2Q7RTZ1 564 aa10.42□□□□□ -0.74
NEK1-201ENST00000439128 ODAMA1E959 279 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 WNT9BO14905 357 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 IGHV1-2P23083 117 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 NRN1LQ496H8 165 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 IL22RA2Q969J5 263 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 PGLYRP3Q96LB9 341 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
NEK1-201ENST00000439128 PSG2P11465 335 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 CDC34P49427 236 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms