RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
PTPN13-204ENST00000436978 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
PTPN13-204ENST00000436978 LRRC3BQ96PB8 259 aa13.84□□□□□ -0.19
PTPN13-204ENST00000436978 NXF2Q9GZY0 626 aaKnown RBP13.84□□□□□ -0.19
PTPN13-204ENST00000436978 GHITMQ9H3K2 345 aa13.84□□□□□ -0.19
PTPN13-204ENST00000436978 PILRAQ9UKJ1 303 aa13.84□□□□□ -0.19
PTPN13-204ENST00000436978 FNDC1Q4ZHG4 1894 aaPredicted RBP13.83□□□□□ -0.19
PTPN13-204ENST00000436978 NDUFA2O43678 99 aa13.83□□□□□ -0.19
PTPN13-204ENST00000436978 P01737 135 aa13.83□□□□□ -0.19
PTPN13-204ENST00000436978 GPR6P46095 362 aaPredicted RBP13.83□□□□□ -0.19
PTPN13-204ENST00000436978 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.19
PTPN13-204ENST00000436978 ANKRD55Q3KP44 614 aa13.83□□□□□ -0.19
PTPN13-204ENST00000436978 KCNK15Q9H427 330 aa13.83□□□□□ -0.19
PTPN13-204ENST00000436978 DEDDO75618 318 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 WISP3O95389 354 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-204ENST00000436978 POLR2GP62487 172 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTPN13-204ENST00000436978 GCSAMQ8N6F7 178 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 CHST1O43916 411 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 ABCA7Q8IZY2 2146 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 KIAA1324LA8MWY0 1029 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-204ENST00000436978 NPY1RP25929 384 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 NRTNQ99748 197 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
PTPN13-204ENST00000436978 TOLLIPQ9H0E2 274 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 MSL2Q9HCI7 577 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 C5orf17Q8NAS9 161 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 CLEC12BQ2HXU8 276 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 C16orf82Q7Z2V1 217 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 SFXN3Q9BWM7 321 aa13.83□□□□□ -0.2
PTPN13-204ENST00000436978 SF3B6Q9Y3B4 125 aaKnown RBP13.83□□□□□ -0.2
PTPN13-204ENST00000436978 PITX3O75364 302 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 USF1P22415 310 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-204ENST00000436978 Q9N2K0 584 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 IGF2P01344 180 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 IGKV1D-16P01601 117 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 HNRNPA3P51991 378 aaKnown RBP13.82□□□□□ -0.2
PTPN13-204ENST00000436978 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 PGA4P0DJD7 388 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 HPRT1P00492 218 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF645Q8N7E2 425 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 MRGPRFQ96AM1 343 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 MRPS18AQ9NVS2 196 aaKnown RBP13.82□□□□□ -0.2
PTPN13-204ENST00000436978 CSF2RBP32927 897 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 SEZ6L2Q6UXD5 910 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 TMEM251Q8N6I4 163 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 DTX4Q9Y2E6 619 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 MEX3AA1L020 520 aaKnown RBP13.82□□□□□ -0.2
PTPN13-204ENST00000436978 MC5RP33032 325 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 CALHM1Q8IU99 346 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 TCTEX1D1Q8N7M0 179 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 PARD6AQ9NPB6 346 aa13.82□□□□□ -0.2
PTPN13-204ENST00000436978 HPXP02790 462 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 FSTP19883 344 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 G6PCP35575 357 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 TMEM50BP56557 158 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 HERVK_113P61574 105 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 PSG5Q15238 335 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 DGAT2L7PQ6IED9 249 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 ZAR1Q86SH2 424 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 MMP7P09237 267 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-204ENST00000436978 OR4X1Q8NH49 305 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 MRPS18BQ9Y676 258 aaKnown RBP13.81□□□□□ -0.2
PTPN13-204ENST00000436978 MMDQ15546 238 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 HOGA1Q86XE5 327 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 PGLYRP3Q96LB9 341 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 CORTO00230 105 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF205O95201 554 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 PGA5P0DJD9 388 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF273Q14593 569 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 TRBV23-1A0A0A0MS06 115 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 OR5AL1P0C617 328 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 GCSHP23434 173 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 FGF12P61328 243 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 FAM181AQ8N9Y4 354 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 MARS2Q96GW9 593 aaKnown RBP13.81□□□□□ -0.2
PTPN13-204ENST00000436978 OR2V2Q96R30 315 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 OR10AC1Q8NH08 325 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 RSRP1Q9BUV0 290 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 KIR3DL2P43630 455 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF658BQ4V348 819 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-204ENST00000436978 HIGD1AQ9Y241 93 aa13.81□□□□□ -0.2
PTPN13-204ENST00000436978 CCKARP32238 428 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 ZNF552Q9H707 407 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-204ENST00000436978 CCL28Q9NRJ3 127 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 PLSCR3Q9NRY6 295 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 A0A1W2PRD5 423 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 A0A1W2PRF3 423 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 A0A1W2PRM7 423 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 J3QR06 171 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 PTP4A3O75365 173 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 TMEM52Q8NDY8 209 aa13.8□□□□□ -0.2
PTPN13-204ENST00000436978 ADAT3Q96EY9 351 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-204ENST00000436978 GAPDHP04406 335 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms