RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 CLEC9AQ6UXN8 241 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 SEM1Q6ZVN7 128 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 C11orf53Q8IXP5 236 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 SLC25A31Q9H0C2 315 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 WFDC1Q9HC57 220 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 LYRM2Q9NU23 88 aaPredicted RBP14.12□□□□□ -0.15
LIMK1-203ENST00000435201 OR14J1Q9UGF5 321 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 SERPINE2P07093 398 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 NBL1P41271 181 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 POLR2GP62487 172 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIMK1-203ENST00000435201 VAMP2P63027 116 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 ID3Q02535 119 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 BTNL8Q6UX41 500 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 Q6ZRG5 221 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 SPAG16Q8N0X2 631 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 PLEKHF2Q9H8W4 249 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 KCNIP1Q9NZI2 227 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 IGHV3-64DA0A0J9YX35 117 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 SSSCA1O60232 199 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 SPP1P10451 314 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 AKR1C2P52895 323 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 NHLH2Q02577 135 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 AKR1C1Q04828 323 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 C10orf91Q5T1B1 145 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 ATRAIDQ6UW56 229 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 SVBPQ8N300 66 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 PRR18Q8N4B5 295 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 PRR7Q8TB68 274 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 TSNAXQ99598 290 aaKnown RBP14.11□□□□□ -0.15
LIMK1-203ENST00000435201 TREM1Q9NP99 234 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 PLA2G2EQ9NZK7 142 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 SLC25A15Q9Y619 301 aa14.11□□□□□ -0.15
LIMK1-203ENST00000435201 CNOT1A5YKK6 2376 aaKnown RBP14.11□□□□□ -0.15
LIMK1-203ENST00000435201 TRAV39A0A0B4J263 110 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 A0A1B0GU03 582 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 A0A1B0GWJ7 208 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 A6NLC8 198 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 PITX3O75364 302 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 HEXAP06865 529 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 RAB5CP51148 216 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 FABP6P51161 128 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 ZNF266Q14584 549 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 ZNF273Q14593 569 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 CXorf66Q5JRM2 361 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 SLC35E4Q6ICL7 350 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 WDR82Q6UXN9 313 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 ACP7Q6ZNF0 438 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 OR51H1Q8NH63 302 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 NKX6-2Q9C056 277 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 LIN7CQ9NUP9 197 aaKnown RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 UQCC1Q9NVA1 299 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 CARHSP1Q9Y2V2 147 aaKnown RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 RBM7Q9Y580 266 aaKnown RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 FAM24AA6NFZ4 105 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 F8W036 122 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 WRBO00258 174 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 SIGLEC5O15389 551 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 IGLV2-14P01704 120 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 CRYABP02511 175 aaKnown RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 DANCRP0C864 163 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 PSG2P11465 335 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 Q6ZR03 302 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 ZNF826PQ6ZT77 177 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 LYPD6BQ8NI32 183 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 LUZP4Q9P127 313 aa14.1□□□□□ -0.15
LIMK1-203ENST00000435201 INTS1Q8N201 2190 aaKnown RBP14.1□□□□□ -0.15
LIMK1-203ENST00000435201 IGSF23A1L1A6 192 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 TSPAN4O14817 238 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 PSPNO60542 156 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 ADCYAP1P18509 176 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 CEACAM6P40199 344 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 CD200P41217 278 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 SRSF3P84103 164 aaKnown RBP14.09□□□□□ -0.15
LIMK1-203ENST00000435201 BAXQ07812 192 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 SMIM21Q3B7S5 101 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 C1orf185Q5T7R7 199 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 PRAMEF6Q5VXH4 476 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 LSM10Q969L4 123 aaKnown RBP14.09□□□□□ -0.15
LIMK1-203ENST00000435201 SEC11CQ9BY50 192 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 KCNS2Q9ULS6 477 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 FZR1Q9UM11 496 aa14.09□□□□□ -0.15
LIMK1-203ENST00000435201 STRAPQ9Y3F4 350 aaKnown RBP14.09□□□□□ -0.15
LIMK1-203ENST00000435201 LOC105371267A0A1B0GV96 52 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 OOEPA6NGQ2 149 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 RNF212BA8MTL3 300 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 IFNL4K9M1U5 179 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 WNT9BO14905 357 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 CEBPDP49716 269 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-203ENST00000435201 TIMM23BQ5SRD1 257 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 COMMD1Q8N668 190 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 TMEM252Q8N6L7 170 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 RNASE11Q8TAA1 199 aaKnown RBP14.08□□□□□ -0.16
LIMK1-203ENST00000435201 MAGT1Q9H0U3 335 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 MSL2Q9HCI7 577 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF292O60281 2723 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-203ENST00000435201 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 GALMQ96C23 342 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 GPR146Q96CH1 333 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 PPP1R3CQ9UQK1 317 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms