RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 GCSAMQ8N6F7 178 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 DAOP14920 347 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 EFNB1P98172 346 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 PNRC1Q12796 327 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-208ENST00000430669 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 WNT5BQ9H1J7 359 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 DEDDO75618 318 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 CD74P04233 296 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 STUMQ69YW2 141 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 SYNGR2O43760 224 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 SYNGR3O43761 229 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 ONECUT2O95948 504 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 GUK1Q16774 197 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 CDCP2Q5VXM1 449 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 PCNPQ8WW12 178 aaKnown RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 Q9N2K0 584 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 TINAGQ9UJW2 476 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 C20orf202A1L168 122 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF708P17019 499 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 AMELYQ99218 206 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 PARP12Q9H0J9 701 aaKnown RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 OPRK1P41145 380 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 SULT1A1P50225 295 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM50BP56557 158 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 RELL2Q8NC24 303 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 SLC25A38Q96DW6 304 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 TREM2Q9NZC2 230 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 GNG10P50151 68 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 UCP3P55916 312 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 RPH3ALQ9UNE2 315 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 COL5A1P20908 1838 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 AGFG2O95081 481 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 GAPDHP04406 335 aaKnown RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 PRDX2P32119 198 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 UBE2G2P60604 165 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 PDCD1Q15116 288 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF331Q9NQX6 463 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 SLC25A10Q9UBX3 287 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 RAB5AP20339 215 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 RPL35P42766 123 aaKnown RBP9.98□□□□□ -0.81
PTCH1-208ENST00000430669 NPBWR1P48145 328 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 IFITM3Q01628 133 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 B4DEV8 164 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 NKX2-8O15522 239 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 OR5G3P0C626 314 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 WIPI2Q9Y4P8 454 aa9.98□□□□□ -0.81
PTCH1-208ENST00000430669 LINC00862A6NCI5 91 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 K7N7A8 449 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 NPIPB7O75200 414 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 BRS3P32247 399 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 COL10A1Q03692 680 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TIMM23BQ5SRD1 257 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 MARS2Q96GW9 593 aaKnown RBP9.97□□□□□ -0.81
PTCH1-208ENST00000430669 CABLES2Q9BTV7 478 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 PRDM6Q9NQX0 595 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TNFSF18Q9UNG2 199 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 LYPD3O95274 346 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 PRSS50Q9UI38 385 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 OR10J4P0C629 311 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 RAB4AP20338 218 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM204Q9BSN7 226 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 HCFC1P51610 2035 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 SYNGR1O43759 233 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 ETV3LQ6ZN32 361 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM14DPA8MWL7 114 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TNFSF10P50591 281 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 MRPS11P82912 194 aaKnown RBP9.97□□□□□ -0.81
PTCH1-208ENST00000430669 CCDC144NLQ6NUI1 221 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 CLRN3Q8NCR9 226 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 FAM216AQ8WUB2 273 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 SNX22Q96L94 193 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM222Q9H0R3 208 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 MASP2O00187 686 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 MGST3O14880 152 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 FOXL2P58012 376 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
PTCH1-208ENST00000430669 ABHD14AQ9BUJ0 271 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 C1RLQ9NZP8 487 aa9.97□□□□□ -0.81
PTCH1-208ENST00000430669 CCL21O00585 134 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 PIN1P1O15428 100 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 S100A8P05109 93 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 HOXD11P31277 338 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-208ENST00000430669 HLA-GP17693 338 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 MRPL13Q9BYD1 178 aaKnown RBP9.96□□□□□ -0.81
PTCH1-208ENST00000430669 PARP11Q9NR21 331 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 DEFB108AA8MXU0 73 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 H3BP45 60 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 SCGB2A2Q13296 93 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM105Q8N8V8 129 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 ADAMTS17Q8TE56 1095 aa9.96□□□□□ -0.81
PTCH1-208ENST00000430669 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
PTCH1-208ENST00000430669 ABLIM2Q6H8Q1 611 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms