RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 POLR2GP62487 172 aaKnown RBP eCLIP11.6□□□□□ -0.55
THBS3-202ENST00000428962 SRSF3P84103 164 aaKnown RBP11.6□□□□□ -0.55
THBS3-202ENST00000428962 DEFB109BQ30KR1 87 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 C1orf174Q8IYL3 243 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 PUSL1Q8N0Z8 303 aaKnown RBP11.6□□□□□ -0.55
THBS3-202ENST00000428962 ZADH2Q8N4Q0 377 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 OR8G5Q8NG78 346 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 PLPPR1Q8TBJ4 325 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 BSCL2Q96G97 398 aaPredicted RBP11.6□□□□□ -0.55
THBS3-202ENST00000428962 BCL2L14Q9BZR8 327 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 TMEM231Q9H6L2 316 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 WIPI2Q9Y4P8 454 aa11.6□□□□□ -0.55
THBS3-202ENST00000428962 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.59□□□□□ -0.55
THBS3-202ENST00000428962 HSPA12AO43301 675 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 TSPAN15O95858 294 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 HAND1O96004 215 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 GRPP07492 148 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 CAMLGP49069 296 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 DVL1P1P54792 670 aaPredicted RBP11.59□□□□□ -0.55
THBS3-202ENST00000428962 NHLH2Q02577 135 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 HMGN3Q15651 99 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 VWA1Q6PCB0 445 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
THBS3-202ENST00000428962 HES4Q9HCC6 221 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 PLSCR4Q9NRQ2 329 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 MBNL3Q9NUK0 354 aaKnown RBP11.59□□□□□ -0.55
THBS3-202ENST00000428962 PURGQ9UJV8 347 aaKnown RBP11.59□□□□□ -0.55
THBS3-202ENST00000428962 PROCRQ9UNN8 238 aa11.59□□□□□ -0.55
THBS3-202ENST00000428962 FREM2Q5SZK8 3169 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 A0A1B0GU03 582 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 TMEM30CPA0ZSE6 113 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 NUPL2O15504 423 aaKnown RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 WDR1O75083 606 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 MPV17P39210 176 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 ID3Q02535 119 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 FOXC1Q12948 553 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 GUCA2BQ16661 112 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 RNASE11Q8TAA1 199 aaKnown RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 KCNIP1Q9NZI2 227 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 OR1A1Q9P1Q5 309 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 FAM96BQ9Y3D0 163 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 RBM7Q9Y580 266 aaKnown RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 IGSF23A1L1A6 192 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 FAM24AA6NFZ4 105 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 FAM74A7A6NL05 159 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 RNF212BA8MTL3 300 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 TRIM77I1YAP6 450 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 TIMM8AO60220 97 aaPredicted RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 PRH1P02810 166 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 CD5P06127 495 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 SFTA3P0C7M3 94 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 KITLGP21583 273 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 CD200P41217 278 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 CTAG1AP78358 180 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 MZT1Q08AG7 82 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 ZNF616Q08AN1 781 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 P2RY6Q15077 328 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 IGFBP7Q16270 282 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 ALKBH6Q3KRA9 238 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 FAM74A3Q4VXF1 159 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.56
THBS3-202ENST00000428962 TMEM252Q8N6L7 170 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 HSD17B11Q8NBQ5 300 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 TLNRD1Q9H1K6 362 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 TINAGQ9UJW2 476 aa11.58□□□□□ -0.56
THBS3-202ENST00000428962 H0YL77 283 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 IGLV1-44P01699 117 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 OR8U9P0C7N5 309 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 CECR9P0C854 216 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 GCH1P30793 250 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 ESPL1Q14674 2120 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 TESK1Q15569 626 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 ZNF718Q3SXZ3 478 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 MIDNQ504T8 468 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 PRR18Q8N4B5 295 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 OR8U1Q8NH10 309 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 LSM10Q969L4 123 aaKnown RBP11.57□□□□□ -0.56
THBS3-202ENST00000428962 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 KCNS2Q9ULS6 477 aa11.57□□□□□ -0.56
THBS3-202ENST00000428962 UMAD1C9J7I0 102 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 AGPAT2O15120 278 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 MLNRO43193 412 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 AGFG2O95081 481 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 PSG2P11465 335 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 LMO1P25800 156 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 CD80P33681 288 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 RPL23AP62750 156 aaKnown RBP11.56□□□□□ -0.56
THBS3-202ENST00000428962 PEA15Q15121 130 aa11.56□□□□□ -0.56
THBS3-202ENST00000428962 EIF2S3LQ2VIR3 472 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms