RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CGB3P0DN86 165 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 CGB7P0DN87 165 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 HIST1H1DP16402 221 aaKnown RBP11.86□□□□□ -0.51
SGCE-204ENST00000428696 PAX5Q02548 391 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 MIDNQ504T8 468 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 TRAT1Q6PIZ9 186 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
SGCE-204ENST00000428696 ZNF286AQ9HBT8 521 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 RAB9BQ9NP90 201 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 C12orf4Q9NQ89 552 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
SGCE-204ENST00000428696 ELF5Q9UKW6 265 aaPredicted RBP11.86□□□□□ -0.51
SGCE-204ENST00000428696 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
SGCE-204ENST00000428696 C15orf65H3BRN8 121 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
SGCE-204ENST00000428696 SCGNO76038 276 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 VENTXO95231 258 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 SOX6P35712 828 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 MADCAM1Q13477 382 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 SSX2Q16385 188 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 UTF1Q5T230 341 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 FAM53AQ6NSI3 398 aaPredicted RBP11.85□□□□□ -0.51
SGCE-204ENST00000428696 MZT2AQ6P582 158 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 C9orf139Q6ZV77 190 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 MAFIPQ8WZ33 124 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 AP3S1Q92572 193 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 GALMQ96C23 342 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 ZNF230Q9UIE0 474 aaPredicted RBP11.85□□□□□ -0.51
SGCE-204ENST00000428696 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
SGCE-204ENST00000428696 FAM25AB3EWG3 89 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 FAM25CB3EWG5 89 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 FAM25GB3EWG6 89 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 NPIPB11E5RHQ5 1161 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 ZNF182P17025 639 aaPredicted RBP11.84□□□□□ -0.51
SGCE-204ENST00000428696 HTR1DP28221 377 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 MNDAP41218 407 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 SCAND1P57086 179 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 GNG2P59768 71 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 OR52L2PQ8NGH6 319 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 OR10X1Q8NGY0 326 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 ZNF596Q8TC21 504 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
SGCE-204ENST00000428696 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 PSG11Q9UQ72 335 aa11.84□□□□□ -0.51
SGCE-204ENST00000428696 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
SGCE-204ENST00000428696 SMIM31A0A1B0GVY4 71 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 BTBD17A6NE02 478 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 RGS5O15539 181 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 HSPA12AO43301 675 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 HPGDSO60760 199 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 TMEM127O75204 238 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 NAPSAO96009 420 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 ARL6IP1Q15041 203 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 ZNF626Q68DY1 528 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 GAPTQ8N292 157 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 OR10A7Q8NGE5 316 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 ACOT12Q8WYK0 555 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 MBNL3Q9NUK0 354 aaKnown RBP11.83□□□□□ -0.52
SGCE-204ENST00000428696 CEPT1Q9Y6K0 416 aa11.83□□□□□ -0.52
SGCE-204ENST00000428696 DNAJC9-AS1A6NH13 148 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 H3BMQ9 156 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 J3QR06 171 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 MFNGO00587 321 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 FCER2P06734 321 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 MELTFP08582 738 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 SCTP09683 121 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 RAB13P51153 203 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 HILS1P60008 231 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 TMEM69Q5SWH9 247 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 HACD4Q5VWC8 232 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 Q6YL49 198 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 NUDCD2Q8WVJ2 157 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 LINC00574Q9H8X3 128 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 Q9N2K0 584 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 GFOD1Q9NXC2 390 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 DPM3Q9P2X0 92 aa11.82□□□□□ -0.52
SGCE-204ENST00000428696 A0A0A6YYJ9 748 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 LEUTXA8MZ59 168 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 TRDCB7Z8K6 153 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 TRIM77I1YAP6 450 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 EIF4EP06730 217 aaKnown RBP11.81□□□□□ -0.52
SGCE-204ENST00000428696 FCGR3AP08637 254 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 GSTP1P09211 210 aaKnown RBP11.81□□□□□ -0.52
SGCE-204ENST00000428696 PPP1CCP36873 323 aaKnown RBP11.81□□□□□ -0.52
SGCE-204ENST00000428696 CEACAM3P40198 252 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 GNMTQ14749 295 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms