RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 AQP4P55087 323 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 LOXL3P58215 753 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 ZNF816Q0VGE8 651 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-202ENST00000427943 KPRPQ5T749 579 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-202ENST00000427943 SYT6Q5T7P8 510 aaPredicted RBP14.61□□□□□ -0.07
PSPC1-202ENST00000427943 MOB3BQ86TA1 216 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 CDH26Q8IXH8 852 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 PRR18Q8N4B5 295 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 C5orf56Q8N8D9 126 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 OR4X2Q8NGF9 303 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 OR52M1Q8NGK5 317 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 THRSPQ92748 146 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 Q96M66 194 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 TMED9Q9BVK6 235 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 MND1Q9BWT6 205 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 PEX16Q9Y5Y5 336 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 IGHV1-3A0A0C4DH29 117 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 UBE2QL1A1L167 161 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 SLC31A2O15432 143 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 GAPDHP04406 335 aaKnown RBP14.6□□□□□ -0.07
PSPC1-202ENST00000427943 GP2P55259 537 aaKnown RBP14.6□□□□□ -0.07
PSPC1-202ENST00000427943 GPR50Q13585 617 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 ACSM3Q53FZ2 586 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 C6orf141Q5SZD1 244 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 OR10V1Q8NGI7 309 aa14.6□□□□□ -0.07
PSPC1-202ENST00000427943 TSSC4Q9Y5U2 329 aaPredicted RBP14.6□□□□□ -0.07
PSPC1-202ENST00000427943 PSMB11A5LHX3 300 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 HBZP02008 142 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 RCC1P18754 421 aaPredicted RBP14.59□□□□□ -0.07
PSPC1-202ENST00000427943 RBM48Q5RL73 367 aaKnown RBP14.59□□□□□ -0.07
PSPC1-202ENST00000427943 SIGIRRQ6IA17 410 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 LINC00311Q8N616 119 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 OR1L1Q8NH94 360 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 NRG4Q8WWG1 115 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 UQCC2Q9BRT2 126 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 GNG12Q9UBI6 72 aa14.59□□□□□ -0.07
PSPC1-202ENST00000427943 LSM2Q9Y333 95 aaKnown RBP14.59□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A10PA6NDY2 464 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 FAM90A7PA6NKC0 464 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 FAM90A23PA8MXZ1 464 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 SPINT2O43291 252 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 FGF16O43320 207 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 MPIG6BO95866 241 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 CD33P20138 364 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 FUT3P21217 361 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 MED22Q15528 200 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 C6orf183Q5T699 404 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 UNQ9370/PRO34162Q6UXP9 181 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 C5orf24Q7Z6I8 188 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 RTN4IP1Q8WWV3 396 aaPredicted RBP14.58□□□□□ -0.08
PSPC1-202ENST00000427943 RBMXL1Q96E39 390 aaKnown RBP14.58□□□□□ -0.08
PSPC1-202ENST00000427943 NOL4LQ96MY1 436 aaPredicted RBP14.58□□□□□ -0.08
PSPC1-202ENST00000427943 KCNK15Q9H427 330 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 SCN3BQ9NY72 215 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 LINC00527Q9UJ94 153 aa14.58□□□□□ -0.08
PSPC1-202ENST00000427943 PDCD6O75340 191 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 SC5DO75845 299 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 PF4P02776 101 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 IL3RAP26951 378 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 SPHARQ15513 63 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 NKAPLQ5M9Q1 402 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 RNLSQ5VYX0 342 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 OR10K2Q6IF99 312 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 ZNF329Q86UD4 541 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 LRRTM1Q86UE6 522 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 IZUMO1Q8IYV9 350 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 GAPTQ8N292 157 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 MS4A15Q8N5U1 240 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 C8orf31Q8N9H6 132 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 ZNF439Q8NDP4 499 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 ST6GALNAC6Q969X2 333 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 PHF21AQ96BD5 680 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 EAF1Q96JC9 268 aaPredicted RBP14.57□□□□□ -0.08
PSPC1-202ENST00000427943 CST11Q9H112 138 aa14.57□□□□□ -0.08
PSPC1-202ENST00000427943 SERPINE3A8MV23 424 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 H0YHG0 523 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 IGLL1P15814 213 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 EBI3Q14213 229 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 GNMTQ14749 295 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 TRAT1Q6PIZ9 186 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 SLC25A48Q6ZT89 311 aaKnown RBP14.56□□□□□ -0.08
PSPC1-202ENST00000427943 TAF9BQ9HBM6 251 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 RAB9BQ9NP90 201 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 GHRLQ9UBU3 117 aa14.56□□□□□ -0.08
PSPC1-202ENST00000427943 NCBP2LA6PVI3 153 aaKnown RBP14.55□□□□□ -0.08
PSPC1-202ENST00000427943 ZNF736B4DX44 427 aaPredicted RBP14.55□□□□□ -0.08
PSPC1-202ENST00000427943 CA11O75493 328 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 VSIG8P0DPA2 414 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 ZNF134P52741 427 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 SLC35A2P78381 396 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 IRF3Q14653 427 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 TMEM30BQ3MIR4 351 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 Q3ZCU0 254 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 HSD17B12Q53GQ0 312 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 CT45A1Q5HYN5 189 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 LIPKQ5VXJ0 399 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 GLT8D1Q68CQ7 371 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 CEACAM19Q7Z692 300 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 SLC35E3Q7Z769 313 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms