RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR1L1Q8NH94 360 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 FAM222BQ8WU58 562 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 C18orf12Q96KH6 178 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 DIRC2Q96SL1 478 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 NDRG3Q9UGV2 375 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 CACNA1DQ01668 2161 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 KIAA2026Q5HYC2 2103 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 E7EQL1 145 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 OR10V1Q8NGI7 309 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 NEUROG1Q92886 237 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 GPHA2Q96T91 129 aa22.17■■□□□ 1.14
LDB1-202ENST00000425280 VSTM5A8MXK1 200 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 IFNA21P01568 189 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 CD55P08174 381 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 AP2S1P53680 142 aaPredicted RBP22.16■■□□□ 1.14
LDB1-202ENST00000425280 LGI3Q8N145 548 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 LILRB1Q8NHL6 650 aaPredicted RBP22.16■■□□□ 1.14
LDB1-202ENST00000425280 ANGPTL6Q8NI99 470 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 LHFPL5Q8TAF8 219 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 MRGPRDQ8TDS7 321 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 SNX22Q96L94 193 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 RNF126Q9BV68 326 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 GSKIPQ9P0R6 139 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.16■■□□□ 1.14
LDB1-202ENST00000425280 ERVH48-1M5A8F1 160 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 CYB5R3P00387 301 aaPredicted RBP22.16■■□□□ 1.14
LDB1-202ENST00000425280 CCL8P80075 99 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 IAH1Q2TAA2 248 aaPredicted RBP22.16■■□□□ 1.14
LDB1-202ENST00000425280 LYZL2Q7Z4W2 148 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 CMTM1Q8IZ96 169 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 TMEM222Q9H0R3 208 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 PPP1R3CQ9UQK1 317 aa22.16■■□□□ 1.14
LDB1-202ENST00000425280 H0YIZ8 118 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 CFDP00746 253 aaPredicted RBP22.15■■□□□ 1.14
LDB1-202ENST00000425280 CEACAM6P40199 344 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 LUMP51884 338 aaPredicted RBP22.15■■□□□ 1.14
LDB1-202ENST00000425280 ZCCHC24Q8N2G6 241 aaKnown RBP22.15■■□□□ 1.14
LDB1-202ENST00000425280 BVESQ8NE79 360 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 OR13A1Q8NGR1 328 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 GALMQ96C23 342 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 PARP12Q9H0J9 701 aaKnown RBP22.15■■□□□ 1.14
LDB1-202ENST00000425280 ITPR1Q14643 2758 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 HBZP02008 142 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 CD3EP07766 207 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 TLE1Q04724 770 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 EDDM3AQ14507 147 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 C6orf183Q5T699 404 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 TGIF2LYQ8IUE0 185 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 ADGRG4Q8IZF6 3080 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 DNTTIP1Q9H147 329 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 ITGB1BP2Q9UKP3 347 aa22.15■■□□□ 1.14
LDB1-202ENST00000425280 RNF222A6NCQ9 220 aa22.14■■□□□ 1.13
LDB1-202ENST00000425280 PGLYRP1O75594 196 aaPredicted RBP22.14■■□□□ 1.13
LDB1-202ENST00000425280 CA5BP1Q8WTZ4 195 aa22.14■■□□□ 1.13
LDB1-202ENST00000425280 LURAP1Q96LR2 239 aa22.14■■□□□ 1.13
LDB1-202ENST00000425280 FBXO9Q9UK97 447 aaPredicted RBP22.14■■□□□ 1.13
LDB1-202ENST00000425280 TNFSF12O43508 249 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 TNFRSF1AP19438 455 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 HTR2BP41595 481 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 RAB32Q13637 225 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 ZNF345Q14585 488 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 MEX3BQ6ZN04 569 aaKnown RBP22.13■■□□□ 1.13
LDB1-202ENST00000425280 FAM219AQ8IW50 185 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 ZNRF1Q8ND25 227 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 PPP1R35Q8TAP8 253 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 UBE2J1Q9Y385 318 aaPredicted RBP22.13■■□□□ 1.13
LDB1-202ENST00000425280 MAB21L2Q9Y586 359 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 DYSFO75923 2080 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 A0A0D9SG52 128 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 MGST3O14880 152 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 OR2F2O95006 317 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 IL2RGP31785 369 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 OR2F1Q13607 317 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 EXOSC2Q13868 293 aaKnown RBP22.13■■□□□ 1.13
LDB1-202ENST00000425280 KCNRGQ8N5I3 272 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 FAM122AQ96E09 287 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 DCTN5Q9BTE1 182 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 DCAF16Q9NXF7 216 aa22.13■■□□□ 1.13
LDB1-202ENST00000425280 K7N7A8 449 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 RP2O75695 350 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 IGLV2-14P01704 120 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 SRPXP78539 464 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 STUMQ69YW2 141 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 ACOT7LQ6ZUV0 252 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 LRRC46Q96FV0 321 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 TMEM56Q96MV1 263 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 KCNJ16Q9NPI9 418 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 TMEM56-RWDD3S4R434 201 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 COL6A6A6NMZ7 2263 aa22.12■■□□□ 1.13
LDB1-202ENST00000425280 LYL1P12980 280 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 SSTR5P35346 364 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 PRSS54Q6PEW0 395 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 OR52L2PQ8NGH6 319 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 DCUN1D4Q92564 292 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 OR5AC2Q9NZP5 309 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 PLAUP00749 431 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 IFNA7P01567 189 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 IRF2P14316 349 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 TMEM268Q5VZI3 342 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 SLC35G3Q8N808 338 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms