RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
CALD1-206ENST00000424922 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
CALD1-206ENST00000424922 DYSFO75923 2080 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 FAM208BQ5VWN6 2430 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 A6NLC8 198 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 DEFB108AA8MXU0 73 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 FGF2P09038 288 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 LUMP51884 338 aaPredicted RBP12.66□□□□□ -0.38
CALD1-206ENST00000424922 FGF12P61328 243 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 MZT1Q08AG7 82 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
CALD1-206ENST00000424922 POC1AQ8NBT0 407 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 ZNF471Q9BX82 626 aaPredicted RBP12.66□□□□□ -0.38
CALD1-206ENST00000424922 C1orf123Q9NWV4 160 aa12.66□□□□□ -0.38
CALD1-206ENST00000424922 DOPEY1Q5JWR5 2465 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 KRBOX1C9JBD0 128 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 ADAP1O75689 374 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 SPRNQ5BIV9 151 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.38
CALD1-206ENST00000424922 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 POM121CA8CG34 1229 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 C19orf84I3L1E1 186 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 PET100P0DJ07 73 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 FUT3P21217 361 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 RBMXP38159 391 aaKnown RBP12.65□□□□□ -0.38
CALD1-206ENST00000424922 CD200P41217 278 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 FAM58AQ8N1B3 248 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 OR2V2Q96R30 315 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 TLNRD1Q9H1K6 362 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 SAV1Q9H4B6 383 aaPredicted RBP12.65□□□□□ -0.38
CALD1-206ENST00000424922 METTL8Q9H825 291 aaKnown RBP12.65□□□□□ -0.38
CALD1-206ENST00000424922 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 LRBAP50851 2863 aa12.65□□□□□ -0.38
CALD1-206ENST00000424922 TMEM238LA0A1B0GVL6 79 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 H0YIZ8 118 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 DUSP1P28562 367 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 RAB13P51153 203 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 UCP3P55916 312 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 SRSF7Q16629 238 aaKnown RBP eCLIP12.64□□□□□ -0.39
CALD1-206ENST00000424922 Q6ZS49 121 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 BVESQ8NE79 360 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 TMEM68Q96MH6 324 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 CISD1Q9NZ45 108 aaKnown RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 NDUFS6O75380 124 aaKnown RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 APOBEC3AP31941 199 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 NUP62P37198 522 aaPredicted RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 ERVK11-1P61568 191 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
CALD1-206ENST00000424922 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 MEGF10Q96KG7 1140 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 OR10C1Q96KK4 312 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 NRIP2Q9BQI9 281 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
CALD1-206ENST00000424922 RAB19A4D1S5 217 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 NXPH2O95156 264 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 KNG1P01042 644 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 FABP1P07148 127 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 ZNF728P0DKX0 622 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 HOXA4Q00056 320 aaPredicted RBP12.63□□□□□ -0.39
CALD1-206ENST00000424922 Q8IYB0 196 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 GALNT14Q96FL9 552 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 SHARPINQ9H0F6 387 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 CBY1Q9Y3M2 126 aa12.63□□□□□ -0.39
CALD1-206ENST00000424922 WRBO00258 174 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 PTBP3O95758 552 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 TNFAIP6P98066 277 aaPredicted RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 ZCCHC24Q8N2G6 241 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 TMEM204Q9BSN7 226 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 LIME1Q9H400 295 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 BARX1Q9HBU1 254 aaPredicted RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 WNT9BO14905 357 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 ACAA1P09110 424 aaPredicted RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 TPT1P13693 172 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 TNFSF4P23510 183 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 MOGAT3Q86VF5 341 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 RRNAD1Q96FB5 475 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 PRR13Q9NZ81 148 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 IL19Q9UHD0 177 aa12.62□□□□□ -0.39
CALD1-206ENST00000424922 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
CALD1-206ENST00000424922 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms