RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SLC35E1Q96K37 410 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 FCRL1Q96LA6 429 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 LINC00477Q96M19 166 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 OR7D2Q96RA2 312 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 GGACTQ9BVM4 153 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 GNB1LQ9BYB4 327 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 ZBP1Q9H171 429 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 RNASE7Q9H1E1 156 aaKnown RBP2.84□□□□□ -1.95
SF3B1-205ENST00000424674 NOX3Q9HBY0 568 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 MARCH5Q9NX47 278 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 UHRF1BP1Q6BDS2 1440 aa2.84□□□□□ -1.96
SF3B1-205ENST00000424674 SMG6Q86US8 1419 aaKnown RBP2.84□□□□□ -1.96
SF3B1-205ENST00000424674 RLFQ13129 1914 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 WDR81Q562E7 1941 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PHF3Q92576 2039 aaKnown RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 TRAV8-3A0A0A6YYJ7 113 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PVALEFA0A1B0GWK0 134 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 WI2-2373I1.2A0A1W2PRP0 233 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PLAC8L1A1L4L8 177 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CD300LBA8K4G0 201 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 SMIM1B2RUZ4 78 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 UPK1AO00322 258 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF780AO75290 641 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PIAS1O75925 651 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 C1QCP02747 245 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 TSPAN19P0C672 248 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 IGHV3-43DP0DP04 118 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 LMO2P25791 158 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CD70P32970 193 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 NCBP2P52298 156 aaKnown RBP eCLIP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 RPS20P60866 119 aaKnown RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 UBE2NP61088 152 aaKnown RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 GNG5P63218 68 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CDK5Q00535 292 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PAX8Q06710 450 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CD47Q08722 323 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF616Q08AN1 781 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ADIGQ0VDE8 80 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM267Q0VDI3 215 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ARFRP1Q13795 201 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 JOSD1Q15040 202 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF404Q494X3 552 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 OR2B11Q5JQS5 317 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 IGFL2Q6UWQ7 119 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 TMUB2Q71RG4 321 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 ZCCHC24Q8N2G6 241 aaKnown RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 SLC25A45Q8N413 288 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 AQP11Q8NBQ7 271 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 OR13C4Q8NGS5 318 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 OR51H1Q8NH63 302 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 RXFP4Q8TDU9 374 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CANT1Q8WVQ1 401 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 GHSRQ92847 366 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 GALMQ96C23 342 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 TM4SF18Q96CE8 201 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 OR52B2Q96RD2 323 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 MND1Q9BWT6 205 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 PBOV1Q9GZY1 135 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 EDA2RQ9HAV5 297 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 UQCC1Q9NVA1 299 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 AIG1Q9NVV5 245 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 CALML5Q9NZT1 146 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 MDFICQ9P1T7 246 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 WASHC3Q9Y3C0 194 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 FIS1Q9Y3D6 152 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 INSIG2Q9Y5U4 225 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 HEBP2Q9Y5Z4 205 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 RFNGQ9Y644 331 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 RTL1A6NKG5 1358 aa2.83□□□□□ -1.96
SF3B1-205ENST00000424674 MTCL1Q9Y4B5 1905 aaKnown RBP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 WRNQ14191 1432 aaPredicted RBP eCLIP2.83□□□□□ -1.96
SF3B1-205ENST00000424674 FAM236DA0A1B0GTK5 79 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 LOC389332A0A1B0GUA5 103 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 A0A1B0GX51 115 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM189A5PLL7 270 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 CCDC160A6NGH7 325 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SHISA9B4DS77 424 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 PRAC2D3DTV9 90 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SLC37A4O43826 429 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 ANGPTL7O43827 346 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SNAP91O60641 907 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 DHRS3O75911 302 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 KCNK2O95069 426 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 TNFSF15O95150 251 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 FAM107AO95990 144 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 IGKV3-20P01619 116 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 IGHMP01871 453 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 HTR1AP08908 422 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 LGALS1P09382 135 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 MPC1LP0DKB6 136 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 FAM236CP0DP71 79 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 FGF6P10767 208 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 CTLA4P16410 223 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 GADD45AP24522 165 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 HSPA9P38646 679 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF138P52744 262 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 EMP1P54849 157 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 GFERP55789 205 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 NCALDP61601 193 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms