RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PITPNAQ00169 270 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 MMDQ15546 238 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 PIGYQ3MUY2 71 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 ASCL4Q6XD76 172 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 SERPINA12Q8IW75 414 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 OR5D14Q8NGL3 314 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 IGHV3-43A0A0B4J1X8 118 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 OR4C45A6NMZ5 311 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 SULT1B1O43704 296 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 HTR1AP08908 422 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 IGHV3-43DP0DP04 118 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 LSAMPQ13449 338 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 CT45A1Q5HYN5 189 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 STEAP3Q658P3 488 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 PARP16Q8N5Y8 322 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 CT45A3Q8NHU0 189 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 FLYWCH2Q96CP2 140 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
CHCHD3-202ENST00000423635 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 LANCL1O43813 399 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 SOX15O60248 233 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 HSPB1P04792 205 aaKnown RBP12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 CRIP2P52943 208 aaPredicted RBP12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 KDM4DQ6B0I6 523 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 LIN54Q6MZP7 749 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 UBALD1Q8TB05 177 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 RITA1Q96K30 269 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 ZNF581Q9P0T4 197 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
CHCHD3-202ENST00000423635 TNCP24821 2201 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 TCRBV3S1A0A5B6 114 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 J3QRE1 110 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 GABRPO00591 440 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 SLC16A6O15403 523 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 MT-ND4P03905 459 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 T-ENOLP0DO92 83 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 CALB2P22676 271 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 ACTBP60709 375 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 OR8J1Q8NGP2 316 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 RFKQ969G6 155 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 ST3GAL6Q9Y274 331 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 ERGIC3Q9Y282 383 aa12.83□□□□□ -0.36
CHCHD3-202ENST00000423635 PCLOQ9Y6V0 5065 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 ARSBP15848 533 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 ALKBH1Q13686 389 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 RSU1Q15404 277 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 C5orf64Q2M2E5 130 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 ZNF529Q6P280 563 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 HAPLN4Q86UW8 402 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 TCTEX1D1Q8N7M0 179 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 NPBQ8NG41 125 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 OR10K1Q8NGX5 313 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 TNFAIP8L1Q8WVP5 186 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 PELI1Q96FA3 418 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 THTPAQ9BU02 230 aa12.82□□□□□ -0.36
CHCHD3-202ENST00000423635 A0A1W2PN81 502 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 NBR2O15453 112 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 HTR3BO95264 441 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 CNTFRP26992 372 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 CHRNA7P36544 502 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 RAB40BQ12829 278 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 RHOVQ96L33 236 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 CST11Q9H112 138 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 FOXA2Q9Y261 457 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 FBXO7Q9Y3I1 522 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
CHCHD3-202ENST00000423635 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 G3V2T6 193 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 NDUFA3O95167 84 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 PYHIN1Q6K0P9 492 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 LINC00596Q86U02 117 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 SATL1Q86VE3 508 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 GPER1Q99527 375 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 RIBC2Q9H4K1 309 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 IL36GQ9NZH8 169 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
CHCHD3-202ENST00000423635 DAPL1A0PJW8 107 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 J3QLW9 94 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 AIPO00170 330 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 GEMIN2O14893 280 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms