RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SPINT2O43291 252 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 HLA-DQB1P01920 261 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 HBZP02008 142 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV4-38-2P0DP08 117 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 DTYMKP23919 212 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 TALDO1P37837 337 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 HCP5Q6MZN7 132 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 OR10A7Q8NGE5 316 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 RFESDQ8TAC1 157 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 UBALD1Q8TB05 177 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 LHX4Q969G2 390 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 RAB9BQ9NP90 201 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 IDI2-AS1Q9NZ38 188 aa13.89□□□□□ -0.19
COL7A1-202ENST00000422991 CENPVL3A0A0U1RRI6 287 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 TPPPO94811 219 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 FPR2P25090 351 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 MADCAM1Q13477 382 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 BAIAP2L2Q6UXY1 529 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 Q6ZS49 121 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 C5orf24Q7Z6I8 188 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 OR1L1Q8NH94 360 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 NANPQ8TBE9 248 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 GCDHQ92947 438 aaPredicted RBP13.88□□□□□ -0.19
COL7A1-202ENST00000422991 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 TMEM133Q9H2Q1 129 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 HEXA-AS1Q9H8Q6 139 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 ZNF230Q9UIE0 474 aaPredicted RBP13.88□□□□□ -0.19
COL7A1-202ENST00000422991 CDC42EP3Q9UKI2 254 aa13.88□□□□□ -0.19
COL7A1-202ENST00000422991 MRPS7Q9Y2R9 242 aaKnown RBP13.88□□□□□ -0.19
COL7A1-202ENST00000422991 COX7A1P24310 79 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 TNFSF8P32971 234 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 GUCA2AQ02747 115 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL7A1-202ENST00000422991 TMEM30BQ3MIR4 351 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 GPR157Q5UAW9 335 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 OR52W1Q6IF63 320 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 SNX29P2Q8IUI4 249 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 PNKDQ8N490 385 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 PRR18Q8N4B5 295 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 OR52M1Q8NGK5 317 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 MAFIPQ8WZ33 124 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 SUCNR1Q9BXA5 334 aa13.87□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 A0A087X0M5 115 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV2-26A0A0B4J1V2 119 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV1-69DA0A0B4J2H0 117 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 A0A1B0GX30 115 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 FAM172BPA6NC97 362 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 TRDCB7Z8K6 153 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 SDCBPO00560 298 aaPredicted RBP13.86□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV1-69P01742 117 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 NFYBP25208 207 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 CD34P28906 385 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 S100A5P33763 92 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 PRSS3P35030 304 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 SRP14P37108 136 aaKnown RBP13.86□□□□□ -0.19
COL7A1-202ENST00000422991 UBE2E1P51965 193 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 LOXL3P58215 753 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 LTC4SQ16873 150 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 UTF1Q5T230 341 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 PDZD9Q8IXQ8 264 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 OCSTAMPQ9BR26 566 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 BEX2Q9BXY8 128 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 ZNF286AQ9HBT8 521 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 GFOD1Q9NXC2 390 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 NUP50Q9UKX7 468 aa13.86□□□□□ -0.19
COL7A1-202ENST00000422991 IGKV1D-8A0A087WSZ0 117 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 MEIOCA2RUB1 952 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 ODF3BA8MYP8 253 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 KIR2DS4P43632 304 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 CBX5P45973 191 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 HTD2P86397 168 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 KIR2DS1Q14954 304 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 OR11H6Q8NGC7 330 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 OR6Q1Q8NGQ2 317 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 GPX8Q8TED1 209 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 GALMQ96C23 342 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 ABHD1Q96SE0 405 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 SOSTQ9BQB4 213 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 CLEC7AQ9BXN2 247 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 SCPEP1Q9HB40 452 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 RABL2AQ9UBK7 228 aaPredicted RBP13.85□□□□□ -0.19
COL7A1-202ENST00000422991 ANAPC10Q9UM13 185 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 RABL2BQ9UNT1 228 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 JMJD1CQ15652 2540 aa13.85□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV3-43A0A0B4J1X8 118 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 IGKV1-6A0A0C4DH72 117 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 MEIS3P1A6NDR6 274 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 FABP7O15540 132 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 CRLF1O75462 422 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 LPLP06858 475 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 SCTP09683 121 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 IGHV3-43DP0DP04 118 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 BPIFB3P59826 476 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 GNMTQ14749 295 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 HERPUD1Q15011 391 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 CHRFAM7AQ494W8 412 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms