RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 VAX1Q5SQQ9 334 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 REC114Q7Z4M0 266 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 TMEM252Q8N6L7 170 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 VSTM2AQ8TAG5 236 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 CHST5Q9GZS9 411 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 THYN1Q9P016 225 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 CD1AP06126 327 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 CISD3P0C7P0 127 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 ZNF841Q6ZN19 808 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 KLF7O75840 302 aaPredicted RBP10.8□□□□□ -0.68
CLCN4-203ENST00000421085 PRRX1P54821 245 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 OR8I2Q8N0Y5 310 aa10.8□□□□□ -0.68
CLCN4-203ENST00000421085 CENPVL1A0A0U1RR11 272 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 J3KRW8 73 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 FCGR3AP08637 254 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 SLC25A33Q9BSK2 321 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 CELA2BP08218 269 aaPredicted RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 NPY1RP25929 384 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 GPBAR1Q8TDU6 330 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 TUBD1Q9UJT1 453 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 CD1BP29016 333 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 BMI1P35226 326 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 COL25A1Q9BXS0 654 aaPredicted RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 MRPL18Q9H0U6 180 aaKnown RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 PQLC2LA1A4F0 135 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 POU2F2P09086 479 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 SRD5A2P31213 254 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 MEF2BQ02080 365 aaPredicted RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 RAB37Q96AX2 223 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 SOSTQ9BQB4 213 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 ASCL3Q9NQ33 180 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 NRAPQ86VF7 1730 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 M0R3E3 92 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 LINC01565O15544 149 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 MT-CO3P00414 261 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 CXCL10P02778 98 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 GCSHP23434 173 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
CLCN4-203ENST00000421085 RELBQ01201 579 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 DGAT2L7PQ6IED9 249 aa10.79□□□□□ -0.68
CLCN4-203ENST00000421085 MGPP08493 103 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 CARFQ8N187 725 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 ZPBPQ9BS86 351 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 MT-ND6P03923 174 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 ZFP36L2P47974 494 aaKnown RBP10.78□□□□□ -0.68
CLCN4-203ENST00000421085 P2RY4P51582 365 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 RAC3P60763 192 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 ACER2Q5QJU3 275 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 Q6ZS52 159 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 GBGT1Q8N5D6 347 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 RNF122Q9H9V4 155 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 PRNDQ9UKY0 176 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 GPR132Q9UNW8 380 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 COL16A1Q07092 1604 aaPredicted RBP10.78□□□□□ -0.68
CLCN4-203ENST00000421085 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 HBZP02008 142 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 AREGP15514 252 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 GUSBP11Q6P575 273 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 ZNF788Q6ZQV5 615 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 GRAMD2BQ96HH9 432 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 AQP10Q96PS8 301 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 PHF7Q9BWX1 381 aaPredicted RBP10.78□□□□□ -0.68
CLCN4-203ENST00000421085 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 METTL1Q9UBP6 276 aaKnown RBP10.78□□□□□ -0.68
CLCN4-203ENST00000421085 RASL11BQ9BPW5 248 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 OR2H1Q9GZK4 316 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 CD74P04233 296 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 RND3P61587 244 aa10.78□□□□□ -0.68
CLCN4-203ENST00000421085 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 WISP3O95389 354 aaPredicted RBP10.77□□□□□ -0.68
CLCN4-203ENST00000421085 IBA57Q5T440 356 aaKnown RBP10.77□□□□□ -0.68
CLCN4-203ENST00000421085 PTPMT1Q8WUK0 201 aaPredicted RBP10.77□□□□□ -0.68
CLCN4-203ENST00000421085 SNRNP40Q96DI7 357 aaKnown RBP10.77□□□□□ -0.68
CLCN4-203ENST00000421085 SH3BGRL3Q9H299 93 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 IGHV1OR21-1A0A087WYE8 117 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 A0A0B4J293 547 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 GNG7O60262 68 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 ZBTB34Q8NCN2 500 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 SAP30LQ9HAJ7 183 aa10.77□□□□□ -0.68
CLCN4-203ENST00000421085 AMMECR1Q9Y4X0 333 aaPredicted RBP10.77□□□□□ -0.68
CLCN4-203ENST00000421085 SRFP11831 508 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 OTX1P32242 354 aaPredicted RBP10.77□□□□□ -0.69
CLCN4-203ENST00000421085 PRSS27Q9BQR3 290 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 GSN-AS1Q9NRJ2 163 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 PPP1CCP36873 323 aaKnown RBP10.77□□□□□ -0.69
CLCN4-203ENST00000421085 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.69
CLCN4-203ENST00000421085 STXBP6Q8NFX7 210 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms