RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 TTRP02766 147 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
LINC00642-201ENST00000419459 OTX1P32242 354 aaPredicted RBP10.98□□□□□ -0.65
LINC00642-201ENST00000419459 P2RY1P47900 373 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 CAMLGP49069 296 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 RPS23P62266 143 aaKnown RBP10.98□□□□□ -0.65
LINC00642-201ENST00000419459 PPA1Q15181 289 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 FAM57BQ71RH2 274 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 OR13D1Q8NGV5 346 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 MUCL1Q96DR8 90 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 TMEM59Q9BXS4 323 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 C19orf12Q9NSK7 152 aa10.98□□□□□ -0.65
LINC00642-201ENST00000419459 MRPS28Q9Y2Q9 187 aaKnown RBP10.98□□□□□ -0.65
LINC00642-201ENST00000419459 USP9YO00507 2555 aaPredicted RBP10.98□□□□□ -0.65
LINC00642-201ENST00000419459 CXorf65A6NEN9 183 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 M0R1B8 84 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 CDC14BO60729 498 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 THBDP07204 575 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 CECR9P0C854 216 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 RBP2P50120 134 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 PLP2Q04941 152 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 WFDC8Q8IUA0 241 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 OR2AE1Q8NHA4 323 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 ADAT3Q96EY9 351 aaPredicted RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 BOD1Q96IK1 185 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 POM121L2Q96KW2 1035 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 SOX7Q9BT81 388 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 FASNP49327 2511 aaKnown RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 A0A0A6YYD4 124 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 IGHV1-18A0A0C4DH31 117 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 A0A1W2PPE2 198 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 CLDN14O95500 239 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 NGFP01138 241 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 ARG1P05089 322 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 ZNF20P17024 532 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 GRB2P62993 217 aaKnown RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 C9orf152Q5JTZ5 239 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 FAM219AQ8IW50 185 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 SGPP2Q8IWX5 399 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 FAM89BQ8N5H3 189 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 OR8B12Q8NGG6 310 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 CD300LFQ8TDQ1 290 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 RNASE6Q93091 150 aaKnown RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 GALNT14Q96FL9 552 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 NICN1Q9BSH3 213 aa10.97□□□□□ -0.65
LINC00642-201ENST00000419459 ASH1LQ9NR48 2969 aaKnown RBP10.97□□□□□ -0.65
LINC00642-201ENST00000419459 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 C19orf84I3L1E1 186 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 GPR137BO60478 399 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 LCATP04180 440 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 DAOP14920 347 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 APLNRP35414 380 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 WNT5AP41221 380 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 ARFRP1Q13795 201 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 FBXL19-AS1Q494R0 122 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 SOHLH1Q5JUK2 328 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 GLIPR1L1Q6UWM5 242 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 OR13C9Q8NGT0 318 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 RNASE11Q8TAA1 199 aaKnown RBP10.96□□□□□ -0.65
LINC00642-201ENST00000419459 MAFIPQ8WZ33 124 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 SPTSSAQ969W0 71 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 SLAMF9Q96A28 289 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 C20orf24Q9BUV8 137 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 PBOV1Q9GZY1 135 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
LINC00642-201ENST00000419459 CSMD1Q96PZ7 3565 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 SERPINE3A8MV23 424 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 SOCS1O15524 211 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 TGOLN2O43493 480 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 MPIG6BO95866 241 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 CTSDP07339 412 aaPredicted RBP10.96□□□□□ -0.66
LINC00642-201ENST00000419459 PI3P19957 117 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 GLRA1P23415 457 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 TMEM50BP56557 158 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 ERVS71-1P61550 626 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 SPATA46Q5T0L3 261 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 SSX9Q7RTT3 188 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 REC114Q7Z4M0 266 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 COMMD2Q86X83 199 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 ZNF808Q8N4W9 903 aaPredicted RBP10.96□□□□□ -0.66
LINC00642-201ENST00000419459 ZNF383Q8NA42 475 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 SUMF2Q8NBJ7 301 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 OR51E1Q8TCB6 317 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 PRDM13Q9H4Q3 707 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 DECR2Q9NUI1 292 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 EHFQ9NZC4 300 aa10.96□□□□□ -0.66
LINC00642-201ENST00000419459 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
LINC00642-201ENST00000419459 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
LINC00642-201ENST00000419459 GPR37O15354 613 aa10.95□□□□□ -0.66
LINC00642-201ENST00000419459 IGLV1-44P01699 117 aa10.95□□□□□ -0.66
LINC00642-201ENST00000419459 RPS10P46783 165 aaKnown RBP10.95□□□□□ -0.66
LINC00642-201ENST00000419459 SNU13P55769 128 aaKnown RBP10.95□□□□□ -0.66
LINC00642-201ENST00000419459 PKIAP61925 76 aa10.95□□□□□ -0.66
LINC00642-201ENST00000419459 KRTAP27-1Q3LI81 207 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms