RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZNF502Q8TBZ5 544 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC7A13Q8TCU3 470 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 DOK4Q8TEW6 326 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 LCN9Q8WX39 176 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDS1Q92903 461 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLDN23Q96B33 292 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRRC1Q96M27 445 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 COL21A1Q96P44 957 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 CAMK2N2Q96S95 79 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF426Q9BUY5 554 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 TAPBPLQ9BX59 468 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 ING2Q9H160 280 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR51M1Q9H341 326 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 DSN1Q9H410 356 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 REEP1Q9H902 201 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 UCK1Q9HA47 277 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 FANCEQ9HB96 536 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 LYRM4Q9HD34 91 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 KCNJ16Q9NPI9 418 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 ACOT13Q9NPJ3 140 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 LYARQ9NX58 379 aaKnown RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RSL24D1Q9UHA3 163 aaKnown RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 C3orf18Q9UK00 162 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 RAB23Q9ULC3 237 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF443Q9Y2A4 671 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 POFUT2Q9Y2G5 429 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 WIF1Q9Y5W5 379 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 COMMD3-BMI1R4GMX3 469 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 HSPE1-MOB4S4R3N1 261 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 UNC80Q8N2C7 3258 aa2.04□□□□□ -2.08
HMGB1P11-201ENST00000413899 DOCK10Q96BY6 2186 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 XIRP2A4UGR9 3374 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 A0A087WUU8 490 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 A0A087WXM4 84 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 XKRY2A2RUG3 117 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 C7orf66A4D0T2 115 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 C17orf51A8MQB3 221 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 C2orf74A8MZ97 194 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TNFRSF11BO00300 401 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 FAAHO00519 579 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDC42EP2O14613 210 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZW10O43264 779 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 E2F6O75461 281 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 GADD45GO95257 159 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 SOX14O95416 240 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 FADS2O95864 444 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 IFNW1P05000 195 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDK1P06493 297 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC35G6P0C7Q6 338 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 PSKH1P11801 424 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CPMP14384 443 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CSNK2A2P19784 350 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CELP19835 753 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 PTNP21246 168 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CALRP27797 417 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMED10P49755 219 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CRISP1P54107 249 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 STXBP1P61764 594 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NCS1P62166 190 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 BTN3A2P78410 334 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 HOXC5Q00444 222 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDK5Q00535 292 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 IL5RAQ01344 420 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 IFITM3Q01628 133 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 EMX1Q04741 257 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 DGCR6Q14129 220 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR7A5Q15622 319 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 PRSS8Q16651 343 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NDUFAF6Q330K2 333 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CHRFAM7AQ494W8 412 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TRMT12Q53H54 448 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 MRPL2Q5T653 305 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 GPR107Q5VW38 600 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMEM236Q5W0B7 351 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 REEP3Q6NUK4 255 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 PLET1Q6UQ28 207 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TMEM205Q6UW68 189 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 AHSA2Q719I0 299 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 PAGE2Q7Z2X7 111 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NEGR1Q7Z3B1 354 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 OOSP2Q86WS3 158 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CLVS1Q8IUQ0 354 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NKAIN4Q8IVV8 208 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLC30A8Q8IWU4 369 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 LRRC25Q8N386 305 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 DEFB119Q8N690 84 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NATD1Q8N6N6 113 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF321PQ8N8H1 164 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TSTD1Q8NFU3 115 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR4K5Q8NGD3 323 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 OR56B2PQ8NGI1 322 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 COQ8AQ8NI60 647 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 ZNF420Q8TAQ5 688 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 NDNFQ8TB73 568 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 FAM81AQ8TBF8 368 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 DYNC2LI1Q8TCX1 351 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 POP5Q969H6 163 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 DGCR14Q96DF8 476 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 OPALINQ96PE5 141 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms