RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LHX2P50458 406 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM33P57088 247 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 SNAP25P60880 206 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 PRDX4Q13162 271 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 POU6F1Q14863 301 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 EBPQ15125 230 aaKnown RBP3.1□□□□□ -1.91
BRCA1-204ENST00000412061 ALX1Q15699 326 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 OTPQ5XKR4 325 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 LCN8Q6JVE9 175 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 ATP5L2Q7Z4Y8 100 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 PCP2Q8IVA1 136 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM256Q8N2U0 113 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 SLC25A29Q8N8R3 303 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 Q8N976 141 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 OR2Z1Q8NG97 314 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 OR4K5Q8NGD3 323 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 OR2V1Q8NHB1 315 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 DIRAS2Q96HU8 199 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF414Q96IQ9 312 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 DERL3Q96Q80 235 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 NRTNQ99748 197 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 CMSS1Q9BQ75 279 aaKnown RBP3.1□□□□□ -1.91
BRCA1-204ENST00000412061 DCSTAMPQ9H295 470 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 OR51I2Q9H344 312 aa3.1□□□□□ -1.91
BRCA1-204ENST00000412061 FHAD1B1AJZ9 1412 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 C5orf49A4QMS7 147 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 GMNCA6NCL1 334 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 ARGFXA6NJG6 315 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 C9JQL5 133 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 H0YJW9 148 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 K7EPK0 472 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 ISLRO14498 428 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 SOCS1O15524 211 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 IGKV1-39P01597 117 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 IGKV1D-39P04432 117 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 FBP1P09467 338 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 SEC11BP0C7V7 166 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 OR12D1P0DN82 309 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 IGHV1-8P0DP01 117 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 MAP2K4P45985 399 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 CCR6P51684 374 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 PSME3P61289 254 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 HLA-DRB3P79483 266 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM267Q0VDI3 215 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-204ENST00000412061 CDK10Q15131 360 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 BATFQ16520 125 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM241Q24JQ0 296 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 LINC00303Q3SY05 128 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 YIF1BQ5BJH7 314 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 Q6ZRU5 148 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 SLC36A1Q7Z2H8 476 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 MARCH3Q86UD3 253 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 LINC00612Q8N6U2 182 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF555Q8NEP9 628 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 OR2D3Q8NGH3 330 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 EXOSC8Q96B26 276 aaKnown RBP3.09□□□□□ -1.91
BRCA1-204ENST00000412061 DCUN1D1Q96GG9 259 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF382Q96SR6 550 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 TRIM4Q9C037 500 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 NANOGQ9H9S0 305 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 SND1-IT1Q9HBX3 110 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 HMG20AQ9NP66 347 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 INIPQ9NRY2 104 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 DOK5Q9P104 306 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 OR12D3Q9UGF7 316 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 HHLA2Q9UM44 414 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 FAM32AQ9Y421 112 aaKnown RBP3.09□□□□□ -1.91
BRCA1-204ENST00000412061 CACNG2Q9Y698 323 aa3.09□□□□□ -1.91
BRCA1-204ENST00000412061 NAV1Q8NEY1 1877 aa3.09□□□□□ -1.92
BRCA1-204ENST00000412061 GTF3C1Q12789 2109 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 NCOA1Q15788 1441 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 IGKV1-6A0A0C4DH72 117 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 A0A1B0GV72 72 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 EEF1E1-BLOC1S5C9J1V9 151 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 C11orf94C9JXX5 98 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 TMEM250H0YL14 139 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 EEF1E1O43324 174 aaKnown RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 SCO1O75880 301 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 APCSP02743 223 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR5G3P0C626 314 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR13C7P0DN81 318 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 DDTP30046 118 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 MARCKSL1P49006 195 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 CTBP2P56545 445 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 RPS24P62847 133 aaKnown RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 PSG4Q00888 419 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 JOSD1Q15040 202 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 MPPED2Q15777 294 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ACOT6Q3I5F7 207 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ABCA11PQ4W5N1 156 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 RNASE13Q5GAN3 156 aaKnown RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 FAM71E1Q6IPT2 247 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 HIST2H3AQ71DI3 136 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF550Q7Z398 422 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 GLT6D1Q7Z4J2 308 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ORMDL3Q8N138 153 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 C1orf158Q8N1D5 194 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 UBL4BQ8N7F7 174 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF676Q8N7Q3 588 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ZDHHC22Q8N966 263 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms