RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TRMT12Q53H54 448 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 ACSBG2Q5FVE4 666 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 LCN8Q6JVE9 175 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 ZDHHC22Q8N966 263 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 OR51D1Q8NGF3 324 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 OR51H1Q8NH63 302 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 YIPF5Q969M3 257 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 RAD51AP1Q96B01 352 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 CACNG2Q9Y698 323 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 ZBED9Q6R2W3 1325 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 NOS1P29475 1434 aa3.34□□□□□ -1.88
LSM5-205ENST00000409952 C2orf16Q68DN1 1984 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 IGHV3-49A0A0A0MS15 119 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 A0A1B0GUA9 196 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 A0A1W2PP18 115 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 C2orf74A8MZ97 194 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 F5H5P2 479 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 C15orf65H3BRN8 121 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 K7EQS6 105 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 SEC11BP0C7V7 166 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 ZNF83P51522 516 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 FABP5Q01469 135 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 POU6F1Q14863 301 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 TMEM241Q24JQ0 296 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 ACOT6Q3I5F7 207 aaPredicted RBP3.33□□□□□ -1.88
LSM5-205ENST00000409952 CYHR1Q6ZMK1 362 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 SMIM15Q7Z3B0 74 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 GTSCR1Q86UQ5 136 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 CALHM3Q86XJ0 350 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 DOLPP1Q86YN1 238 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 OR2M3Q8NG83 312 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 OR2D3Q8NGH3 330 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 SLC35G5Q96KT7 338 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 OR52B2Q96RD2 323 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 SIGMAR1Q99720 223 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 NPATQ14207 1427 aa3.33□□□□□ -1.88
LSM5-205ENST00000409952 IGKV1-6A0A0C4DH72 117 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 GOLGA6L4A6NEF3 574 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 DISC1C4P0D8 188 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 ZNF878C9JN71 531 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 C11orf94C9JXX5 98 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 KLRC4O43908 158 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 IGLV3-25P01717 112 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 OR56A5P0C7T3 313 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 CD79AP11912 226 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 GTF2F2P13984 249 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 OR1E2P47887 323 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 MARCKSL1P49006 195 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 INPP1P49441 399 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 CCR6P51684 374 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 TMEM33P57088 247 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 SNAP25P60880 206 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 HLA-DRB3P79483 266 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 TMEM267Q0VDI3 215 aaPredicted RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 PSG7Q13046 419 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 LIN52Q52LA3 116 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 FAM78BQ5VT40 261 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 MORN3Q6PF18 240 aaPredicted RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 SLC36A1Q7Z2H8 476 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 ZNF550Q7Z398 422 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 MARCH3Q86UD3 253 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 TAC4Q86UU9 113 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 ZBTB8OSQ8IWT0 167 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 OR9I1Q8NGQ6 314 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 OR5W2Q8NH69 310 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 DCUN1D1Q96GG9 259 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 ACY3Q96HD9 319 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 DIRAS2Q96HU8 199 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 DERL3Q96Q80 235 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 OR52E6Q96RD3 313 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 THTPAQ9BU02 230 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 TRIM4Q9C037 500 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 DCSTAMPQ9H295 470 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 NMNAT1Q9HAN9 279 aaPredicted RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 ZNRD1Q9P1U0 126 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 NYAP2Q9P242 653 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 PRELID3BQ9Y3B1 194 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 ROCK1Q13464 1354 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 COL5A2P05997 1499 aaPredicted RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 GPATCH8Q9UKJ3 1502 aaKnown RBP3.32□□□□□ -1.88
LSM5-205ENST00000409952 KIF26BQ2KJY2 2108 aa3.32□□□□□ -1.88
LSM5-205ENST00000409952 CCDC144AA2RUR9 1427 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 ATRNO75882 1429 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 A8MWL6 223 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 RGS5O15539 181 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 HLA-DQA1P01909 254 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms