RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TPPP2P59282 170 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 RND3P61587 244 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TAF10Q12962 218 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 FZD2Q14332 565 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 SLC9A3R2Q15599 337 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 MORN2Q502X0 79 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 LRRC73Q5JTD7 316 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 RTL6Q6ICC9 239 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR4C11Q6IEV9 310 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 KCNIP4Q6PIL6 250 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TMEM220Q6QAJ8 160 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TIPARPQ7Z3E1 657 aaKnown RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 CDC20BQ86Y33 519 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 FAM219AQ8IW50 185 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 H1FOOQ8IZA3 346 aaPredicted RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 ZNF619Q8N2I2 560 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 RAB42Q8N4Z0 105 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 CSNK1A1LQ8N752 337 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR2M7Q8NG81 312 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR4N2Q8NGD1 307 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR51L1Q8NGJ5 315 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR5H2Q8NGV7 314 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR4K13Q8NH42 304 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 OR51A7Q8NH64 312 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 PTPMT1Q8WUK0 201 aaPredicted RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 Q96M85 177 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 JSRP1Q96MG2 331 aaPredicted RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 MS4A10Q96PG2 267 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 GPX7Q96SL4 187 aaPredicted RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 ALG12Q9BV10 488 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 PARD6GQ9BYG4 376 aaPredicted RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 MAP1LC3BQ9GZQ8 125 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 MAGT1Q9H0U3 335 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 WDR76Q9H967 626 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 PNRC2Q9NPJ4 139 aaKnown RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 STARD5Q9NSY2 213 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 MRM2Q9UI43 246 aaKnown RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 RPH3ALQ9UNE2 315 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 GPR34Q9UPC5 381 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 B3GALT5Q9Y2C3 310 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 IER3IP1Q9Y5U9 82 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 ZNF780BQ9Y6R6 833 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TRAV30A0A087WSZ9 112 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 A0A0A6YYD5 115 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 F6UZH7 168 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 MASP2O00187 686 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CTSVO60911 334 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 ZNF217O75362 1048 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 OR2J2O76002 312 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 LYPD3O95274 346 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 MMP7P09237 267 aaPredicted RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 FUT3P21217 361 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CORO1AP31146 461 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 SFTPDP35247 375 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 PPP1CCP36873 323 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 SRP14P37108 136 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 DNASE1L1P49184 302 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CNN1P51911 297 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 RAB11AP62491 216 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 RPL23AP62750 156 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 LCN2P80188 198 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 ID2Q02363 134 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 DAZAP2Q15038 168 aaPredicted RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 ARL6IP1Q15041 203 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 BATFQ16520 125 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 TMEM41BQ5BJD5 291 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 ACTL10Q5JWF8 245 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 C1orf100Q5SVJ3 147 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 GLYATL3Q5SZD4 288 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 TMEM225Q6GV28 225 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 C16orf54Q6UWD8 224 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 TMEM182Q6ZP80 229 aaPredicted RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 PRIMA1Q86XR5 153 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 ZDHHC23Q8IYP9 409 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 KLHDC1Q8N7A1 406 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CYB561D1Q8N8Q1 229 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 SLC38A9Q8NBW4 561 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 NPEPL1Q8NDH3 523 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 OR4D6Q8NGJ1 314 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 MRGPRFQ96AM1 343 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 ABHD14BQ96IU4 210 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 THOC3Q96J01 351 aaKnown RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 ZNF514Q96K75 400 aaPredicted RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 OR10C1Q96KK4 312 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CIB3Q96Q77 187 aaPredicted RBP4.67□□□□□ -1.66
CLK1-202ENST00000409403 TBX15Q96SF7 602 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 LPAR4Q99677 370 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 CMKLR1Q99788 373 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 AGMATQ9BSE5 352 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 GPR84Q9NQS5 396 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 B3GAT1Q9P2W7 334 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 UQCR10Q9UDW1 63 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 AK3Q9UIJ7 227 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 RNF150Q9ULK6 438 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 PADI3Q9ULW8 664 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 SLC7A11Q9UPY5 501 aa4.67□□□□□ -1.66
CLK1-202ENST00000409403 NSG1A0A0A6YYJ2 146 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms