RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 OR4A8P0C604 315 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 FAM209BQ5JX69 171 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 GFRALQ6UXV0 394 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 RNF122Q9H9V4 155 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 OGG1O15527 345 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 SS18L1O75177 396 aaPredicted RBP10.71□□□□□ -0.69
SHANK2-203ENST00000409161 HLA-DRB1P01911 266 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 SKP2Q13309 424 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 V9GYH0 126 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 TCRBV16S1A1N1A0A5B0 115 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 LIPFP07098 398 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 TCL1AP56279 114 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 FLYWCH2Q96CP2 140 aaKnown RBP10.71□□□□□ -0.69
SHANK2-203ENST00000409161 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 DDA1Q9BW61 102 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 HIGD1AQ9Y241 93 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 TNXAQ16473 311 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
SHANK2-203ENST00000409161 IGHV3-64DA0A0J9YX35 117 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 RPS27P42677 84 aaKnown RBP10.71□□□□□ -0.7
SHANK2-203ENST00000409161 STPG3Q8N7X2 389 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 OR1P1Q8NH06 330 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.7
SHANK2-203ENST00000409161 EWSR1Q01844 656 aaKnown RBP eCLIP10.71□□□□□ -0.7
SHANK2-203ENST00000409161 KLHDC9Q8NEP7 349 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 SF3B5Q9BWJ5 86 aaKnown RBP10.71□□□□□ -0.7
SHANK2-203ENST00000409161 KLF9Q13886 244 aaPredicted RBP10.71□□□□□ -0.7
SHANK2-203ENST00000409161 GHITMQ9H3K2 345 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 TMEM140Q9NV12 185 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 CACNA1BQ00975 2339 aa10.71□□□□□ -0.7
SHANK2-203ENST00000409161 ADAP1O75689 374 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 GHRHP01286 108 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 CD1BP29016 333 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 HSPB9Q9BQS6 159 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 MAP1LC3AQ9H492 121 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 RCC2Q9P258 522 aaKnown RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 PAPPA2Q9BXP8 1791 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 DEFB108AA8MXU0 73 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 F2RL2O00254 374 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 PPP1R17O96001 155 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 CKS2P33552 79 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 LYPD8Q6UX82 237 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 LRRC75AQ8NAA5 344 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 PAXXQ9BUH6 204 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 LEPROTL1O95214 131 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 ZNF117Q03924 483 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 NTMQ9P121 344 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 MRPS11P82912 194 aaKnown RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 TCF24Q7RTU0 167 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 FAM169BQ8N8A8 192 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 HOXC4P09017 264 aaPredicted RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 MAS1LP35410 378 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 TM4SF4P48230 202 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 OR8B3Q8NGG8 313 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 NUBPLQ8TB37 319 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 OR8B2Q96RD0 313 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 GPA33Q99795 319 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 HMGA1P17096 107 aaKnown RBP10.7□□□□□ -0.7
SHANK2-203ENST00000409161 C19orf24Q9BVV8 132 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 CTSVO60911 334 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 GABRG2P18507 467 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 PMELP40967 661 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 C8orf44Q96CB5 159 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 SBF1O95248 1867 aa10.7□□□□□ -0.7
SHANK2-203ENST00000409161 CXCL3P19876 107 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 ZNF683Q8IZ20 524 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 OR8B12Q8NGG6 310 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 MRGPRDQ8TDS7 321 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 WSB2Q9NYS7 404 aaPredicted RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 SYNGR1O43759 233 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 ZNF324O75467 553 aaPredicted RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 ZNF32P17041 273 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 FAM53AQ6NSI3 398 aaPredicted RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 CHST5Q9GZS9 411 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 METTL1Q9UBP6 276 aaKnown RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 WIPI2Q9Y4P8 454 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 S1PR2O95136 353 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 NUDT3O95989 172 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 GALNT14Q96FL9 552 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 ASB1Q9Y576 335 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 ACACAQ13085 2346 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
SHANK2-203ENST00000409161 IL4P05112 153 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 FZD5Q13467 585 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 DLK2Q6UY11 383 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 SARGQ9BW04 601 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 SRD5A2P31213 254 aa10.69□□□□□ -0.7
SHANK2-203ENST00000409161 NPBWR2P48146 333 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms