RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 HSPA12AO43301 675 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 PSPNO60542 156 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 NKX2-1P43699 371 aaPredicted RBP13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 SMIM21Q3B7S5 101 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 PRR18Q8N4B5 295 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 SMIM3Q9BZL3 60 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 ARV1Q9H2C2 271 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 KCNIP1Q9NZI2 227 aa13.98□□□□□ -0.17
PIKFYVE-204ENST00000407449 BORCS7-ASMTA0A0B4J1R7 106 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 M0R1B8 84 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 PVALBP20472 110 aaPredicted RBP13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 CD200P41217 278 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 UFSP2Q9NUQ7 469 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 SPEF1Q9Y4P9 236 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 ZSCAN5BA6NJL1 495 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 IFNL4K9M1U5 179 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 HEXAP06865 529 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 SULT1A2P50226 295 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 BPIFCQ8NFQ6 507 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 MUCL1Q96DR8 90 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 BSCL2Q96G97 398 aaPredicted RBP13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 MMP26Q9NRE1 261 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
PIKFYVE-204ENST00000407449 B8ZZF3 427 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 IGLV2-14P01704 120 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 CRYAAP02489 173 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 MST1LQ2TV78 715 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 IL34Q6ZMJ4 242 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 OR51H1Q8NH63 302 aa13.96□□□□□ -0.17
PIKFYVE-204ENST00000407449 SVILO95425 2214 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 OOEPA6NGQ2 149 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 PTBP3O95758 552 aaKnown RBP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 SERPINE2P07093 398 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 SLC25A6P12236 298 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 MMP9P14780 707 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR3A1P47881 315 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 MSMPQ1L6U9 139 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 FAM209AQ5JX71 171 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 KCNS2Q9ULS6 477 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 RBM7Q9Y580 266 aaKnown RBP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 ARID1AO14497 2285 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 ZFHX4Q86UP3 3567 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 PRRC2CQ9Y520 2896 aaKnown RBP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 MED6O75586 246 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 IGHV3-13P01766 116 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 PSG2P11465 335 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 GLRXP35754 106 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 CEACAM6P40199 344 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 POLR2GP62487 172 aaKnown RBP eCLIP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 BLOC1S1P78537 153 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 EWSR1Q01844 656 aaKnown RBP eCLIP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 ID3Q02535 119 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 CLEC9AQ6UXN8 241 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 BOLLQ8N9W6 283 aaKnown RBP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR10Z1Q8NGY1 313 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 UBALD1Q8TB05 177 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 LRRC29Q8WV35 223 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 COQ2Q96H96 371 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 GINS3Q9BRX5 216 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 WFDC1Q9HC57 220 aa13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 LIN7CQ9NUP9 197 aaKnown RBP13.95□□□□□ -0.18
PIKFYVE-204ENST00000407449 LOC400499M0QZD8 3231 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 PRR14LQ5THK1 2151 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 C12orf77C9JDV5 145 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 SSSCA1O60232 199 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 FBXO24O75426 580 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 VAMP2P63027 116 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 NKX6-1P78426 367 aaPredicted RBP13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 COL10A1Q03692 680 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 FOXC1Q12948 553 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 CXorf66Q5JRM2 361 aaPredicted RBP13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 PXDC1Q5TGL8 231 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 ALKBH2Q6NS38 261 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 LRP11Q86VZ4 500 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR1L1Q8NH94 360 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 GALMQ96C23 342 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 ABHD17AQ96GS6 310 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 PARP12Q9H0J9 701 aaKnown RBP13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 DUSP13Q9UII6 198 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 PPP1R3CQ9UQK1 317 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 TP53TG5Q9Y2B4 290 aa13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 HEATR1Q9H583 2144 aaKnown RBP13.94□□□□□ -0.18
PIKFYVE-204ENST00000407449 A0A1B0GU03 582 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 LPAR6P43657 344 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 KLF3P57682 345 aaPredicted RBP13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 HOXA4Q00056 320 aaPredicted RBP13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 NHLH2Q02577 135 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 AESQ08117 197 aa13.93□□□□□ -0.18
PIKFYVE-204ENST00000407449 PJVKQ0ZLH3 352 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms