RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 EWSR1Q01844 656 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 RTL6Q6ICC9 239 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 FAM57BQ71RH2 274 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 ABHD5Q8WTS1 349 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 C12orf49Q9H741 205 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 USP24Q9UPU5 2620 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 SMG1Q96Q15 3661 aaKnown RBP20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 INTS1Q8N201 2190 aaKnown RBP20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 RER1O15258 196 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 TMEM225BP0DP42 221 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 ATP6V0CP27449 155 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 FOXG1P55316 489 aaPredicted RBP20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 ACSF3Q4G176 576 aaPredicted RBP20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 SLC16A14Q7RTX9 510 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 MCEMP1Q8IX19 187 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 CYB561D1Q8N8Q1 229 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 C9orf106Q8NAJ2 232 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 OR10AD1Q8NGE0 317 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 TVP23CQ96ET8 276 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 SLC7A10Q9NS82 523 aa20.13■□□□□ 0.81
TRIOBP-203ENST00000403663 E9PLN8 166 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 P4HA3Q7Z4N8 544 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 RPRMLQ8N4K4 120 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 FRZBQ92765 325 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 NABP1Q96AH0 204 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 BOD1Q96IK1 185 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 PNRC2Q9NPJ4 139 aaKnown RBP20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 PLEKHJ1Q9NW61 149 aa20.12■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF205O95201 554 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 GLI4P10075 376 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 ICAM4Q14773 271 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 SP5Q6BEB4 398 aaPredicted RBP20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 LIAT1Q6ZQX7 453 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 GPR137CQ8N3F9 429 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 SUCNR1Q9BXA5 334 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 AK3Q9UIJ7 227 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 C5orf63A6NC05 138 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 SCAF4O95104 1147 aaKnown RBP20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF728P0DKX0 622 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 GABRR1P24046 479 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 SSX2Q16385 188 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 ABCA11PQ4W5N1 156 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 FBXL14Q8N1E6 418 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 MSI2Q96DH6 328 aaKnown RBP20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 NIPSNAP3BQ9BS92 247 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 C2orf88Q9BSF0 95 aa20.11■□□□□ 0.81
TRIOBP-203ENST00000403663 SEM1Q6ZVN7 128 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 GPR35Q9HC97 309 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 HSPB1P04792 205 aaKnown RBP20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 LY6DQ14210 128 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 CEACAM16Q2WEN9 425 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 C9orf135Q5VTT2 229 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF283Q8N7M2 679 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 MISP3Q96FF7 219 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 PACRGQ96M98 296 aaPredicted RBP20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 SSX3Q99909 188 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 ELL3Q9HB65 397 aaPredicted RBP20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 PRSS50Q9UI38 385 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 WSB1Q9Y6I7 421 aa20.1■□□□□ 0.81
TRIOBP-203ENST00000403663 TMEM8BA6NDV4 472 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF266Q14584 549 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 SLC35E3Q7Z769 313 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 OR4D5Q8NGN0 318 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 DBHP09172 617 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 FCGR2AP12318 317 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 BTF3P20290 206 aaKnown RBP20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 IL2RGP31785 369 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 GNMTQ14749 295 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 PHLDA2Q53GA4 152 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 LBHQ53QV2 105 aaPredicted RBP20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 KRTCAP3Q53RY4 240 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF506Q5JVG8 444 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 FOXL2NBQ6ZUU3 175 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 OR2C3Q8N628 320 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 OR5R1Q8NH85 324 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 APH1AQ96BI3 265 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 LYZL4Q96KX0 146 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 FAM215AQ9Y5M1 114 aa20.09■□□□□ 0.81
TRIOBP-203ENST00000403663 FAM24AA6NFZ4 105 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 AHRRA9YTQ3 701 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 ATXN7O15265 892 aaPredicted RBP20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 NR2C1P13056 603 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 B4GALT1P15291 398 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 SPCS3P61009 180 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 FOXF2Q12947 444 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 HIST1H2BLQ99880 126 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 C11orf1Q9H5F2 150 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 SLC2A9Q9NRM0 540 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 NECAP2Q9NVZ3 263 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 RELNP78509 3460 aa20.08■□□□□ 0.81
TRIOBP-203ENST00000403663 ZNF850A8MQ14 1090 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 FXYD4P59646 89 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 ENDOGQ14249 297 aaKnown RBP20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 KCNMB1Q16558 191 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 LGI3Q8N145 548 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 OR5L1Q8NGL2 311 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 GMPPAQ96IJ6 420 aaPredicted RBP20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 FAM210BQ96KR6 192 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 SLC25A31Q9H0C2 315 aa20.08■□□□□ 0.8
TRIOBP-203ENST00000403663 SS18L1O75177 396 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms