RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 ST6GALNAC5Q9BVH7 336 aa13.03□□□□□ -0.32
HMGA1-204ENST00000401473 FAM172BPA6NC97 362 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 CLPXO76031 633 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 RBP4P02753 201 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 LOXL3P58215 753 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 MRPS15P82914 257 aaKnown RBP13.02□□□□□ -0.32
HMGA1-204ENST00000401473 PITPNAQ00169 270 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 LTC4SQ16873 150 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 LHX4Q969G2 390 aa13.02□□□□□ -0.32
HMGA1-204ENST00000401473 IGHV3OR16-10A0A075B7F0 116 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV3-7P01780 117 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 FCER2P06734 321 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 TALDO1P37837 337 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 HMGN3Q15651 99 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 C6orf183Q5T699 404 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 OCSTAMPQ9BR26 566 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 ADAM30Q9UKF2 790 aa13.02□□□□□ -0.33
HMGA1-204ENST00000401473 IGKV1-6A0A0C4DH72 117 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PPE2 198 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PR64 198 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 F2RL2O00254 374 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 FSHBP01225 129 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 HOXB4P17483 251 aaPredicted RBP13.01□□□□□ -0.33
HMGA1-204ENST00000401473 DTYMKP23919 212 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 PRSS3P35030 304 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 ZNF554Q86TJ5 538 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 CCDC190Q86UF4 302 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 LEAP2Q969E1 77 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 TMEM160Q9NX00 188 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 IDI2-AS1Q9NZ38 188 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 KCNIP1Q9NZI2 227 aa13.01□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV3-43A0A0B4J1X8 118 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 TRAV40A0A0B4J280 105 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 FABP12A6NFH5 140 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 GSTT2P0CG29 244 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 GSTT2BP0CG30 244 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV3-43DP0DP04 118 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 FPR2P25090 351 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 NFYBP25208 207 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 S100A5P33763 92 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 HERPUD1Q15011 391 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 PNKDQ8N490 385 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 GPX8Q8TED1 209 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 SOX21Q9Y651 276 aaPredicted RBP13□□□□□ -0.33
HMGA1-204ENST00000401473 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
HMGA1-204ENST00000401473 TRDCB7Z8K6 153 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 SPINT2O43291 252 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 IL18Q14116 193 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 SRSF7Q16629 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
HMGA1-204ENST00000401473 IGSF11Q5DX21 431 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 Q6ZS49 121 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 OR52L2PQ8NGH6 319 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 NANPQ8TBE9 248 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 IL1F10Q8WWZ1 152 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 GALMQ96C23 342 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 SUCNR1Q9BXA5 334 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 TMEM133Q9H2Q1 129 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 KLK11Q9UBX7 282 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 V9GYH0 126 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 A0A087X0M5 115 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1B0GX30 115 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 TPPPO94811 219 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 MOB1BQ7L9L4 216 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 SNAPC3Q92966 411 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 ZNF286AQ9HBT8 521 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 OR2S2Q9NQN1 319 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 PSG11Q9UQ72 335 aa12.99□□□□□ -0.33
HMGA1-204ENST00000401473 IGHV2-26A0A0B4J1V2 119 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
HMGA1-204ENST00000401473 COX7A1P24310 79 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 ETV6P41212 452 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 UBE2E1P51965 193 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 ZNF134P52741 427 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 HTD2P86397 168 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 GNMTQ14749 295 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 ZNF79Q15937 498 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 LDLRAD2Q5SZI1 272 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 RUSC1-AS1Q66K80 236 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 OR52W1Q6IF63 320 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 PYHIN1Q6K0P9 492 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 ABHD12Q8N2K0 398 aa12.98□□□□□ -0.33
HMGA1-204ENST00000401473 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms