RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 RBMS3Q6XE24 437 aaKnown RBP14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 BRD3OSQ6XYD6 125 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 Q6ZNX1 250 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 C1orf122Q6ZSJ8 110 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 GDPD3Q7L5L3 318 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 OR5D13Q8NGL4 314 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 ENKURQ8TC29 256 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 LHX4Q969G2 390 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 OCSTAMPQ9BR26 566 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 IFT46Q9NQC8 304 aa14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 RCC2Q9P258 522 aaKnown RBP14.35□□□□□ -0.11
SMIM11A-202ENST00000399295 A0A1W2PPH5 198 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 M0R1W7 72 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 VENTXO95231 258 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 AKAIN1P0CW23 69 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 TBPP20226 339 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 HILS1P60008 231 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 RBM39Q14498 530 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 OLFML2AQ68BL7 652 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 TMEM200BQ69YZ2 307 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 C17orf107Q6ZR85 190 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 C9orf139Q6ZV77 190 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 C6orf201Q7Z4U5 140 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 Q8N7P7 452 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 SIGLECL1Q8N7X8 197 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 NUDCD2Q8WVJ2 157 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 CHST6Q9GZX3 395 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 ANAPC10Q9UM13 185 aa14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 SOX21Q9Y651 276 aaPredicted RBP14.34□□□□□ -0.11
SMIM11A-202ENST00000399295 FAM240BA0A1B0GVZ2 78 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 MCRIP1C9JLW8 97 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 SIRPB1O00241 398 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 SSX5O60225 188 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 OR2H2O95918 312 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 RFX2P48378 723 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 EDDM3BP56851 147 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 GRK1Q15835 563 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 TUSC1Q2TAM9 212 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 ATAD3CQ5T2N8 411 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 NRARPQ7Z6K4 114 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 PDZD9Q8IXQ8 264 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 DUSP18Q8NEJ0 188 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 PPP1R35Q8TAP8 253 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 METTL8Q9H825 291 aaKnown RBP14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 HRASLSQ9HDD0 168 aa14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 ELF5Q9UKW6 265 aaPredicted RBP14.33□□□□□ -0.12
SMIM11A-202ENST00000399295 IGHV1-69DA0A0B4J2H0 117 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 POM121CA8CG34 1229 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 ZNF736B4DX44 427 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 DEGS1O15121 323 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 PSPNO60542 156 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 IGHV1-69P01742 117 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 ZNF44P15621 663 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 NAT1P18440 290 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 DTYMKP23919 212 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 LMO1P25800 156 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 SLC6A1P30531 599 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 PRB3Q04118 309 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 EDDM3AQ14507 147 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 MEF2DQ14814 521 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 KRTAP24-1Q3LI83 254 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 ACTBL2Q562R1 376 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 RUSC1-AS1Q66K80 236 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 STEAP1BQ6NZ63 245 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 CCBE1Q6UXH8 406 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 OR4S1Q8NGB4 309 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 ZNF48Q96MX3 618 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 CMSS1Q9BQ75 279 aaKnown RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 SULT4A1Q9BR01 284 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 FAAP24Q9BTP7 215 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 DPAGT1Q9H3H5 408 aa14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 RIMS4Q9H426 269 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-202ENST00000399295 hCG_1809904A0A1W2PP81 198 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 A0A1W2PPE2 198 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 A0A1W2PR64 198 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 A0A1W2PRV1 198 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 MEIS3P1A6NDR6 274 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 MGST3O14880 152 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 CD74P04233 296 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 PRTN3P24158 256 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 OR3A1P47881 315 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 DLX1P56177 255 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 Q6P435 159 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 HOGA1Q86XE5 327 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 UNKLQ9H9P5 680 aaKnown RBP14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 C12orf4Q9NQ89 552 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 AK3Q9UIJ7 227 aa14.31□□□□□ -0.12
SMIM11A-202ENST00000399295 RNASEK-C17orf49H0YIS7 233 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 RAB3DO95716 219 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 CCL3L1P16619 93 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 ZNF273Q14593 569 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 SRSF7Q16629 238 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 DEFB112Q30KQ8 113 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 NCR3LG1Q68D85 454 aa14.3□□□□□ -0.12
SMIM11A-202ENST00000399295 PLET1Q6UQ28 207 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms