RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CHST5Q9GZS9 411 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PNRC2Q9NPJ4 139 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SLC7A10Q9NS82 523 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RNF150Q9ULK6 438 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PCNX3Q9H6A9 2034 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RALGAPA2Q2PPJ7 1873 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 H3BS24 57 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CYTIPO60759 359 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 TUSC2O75896 110 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CER1O95813 267 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SFTPCP11686 197 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CALCRP30988 508 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 P2RY1P47900 373 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 UBE2NP61088 152 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SURF2Q15527 256 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SHEQ5VZ18 495 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF385CQ66K41 422 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 DNASE2BQ8WZ79 361 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 GPR146Q96CH1 333 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 Q96M66 194 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RARRES2Q99969 163 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OBP2BQ9NPH6 170 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PTPRZ1P23471 2315 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF587BE7ETH6 402 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PF4P02776 101 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 FHITP49789 147 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 WFDC8Q8IUA0 241 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SLC35G3Q8N808 338 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OR2Y1Q8NGV0 311 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 TAAR9Q96RI9 348 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 BARX1Q9HBU1 254 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IGLV3-12A0A075B6K2 115 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM265A0A087WTH1 108 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 C7orf77A4D0Y5 90 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF724A8MTY0 619 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SSSCA1O60232 199 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ACTL6BO94805 426 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ACTL6AO96019 429 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 FKBP2P26885 142 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NPBWR2P48146 333 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF92Q03936 586 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF718Q3SXZ3 478 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 C10orf128Q5T292 105 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CXorf67Q86X51 503 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 FRZBQ92765 325 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZDHHC16Q969W1 377 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CDX2Q99626 313 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 AGFG2O95081 481 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ADCYAP1P18509 176 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IDH3GP51553 393 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 MYPOPQ86VE0 399 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CMTM1Q8IZ96 169 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PLK3Q9H4B4 646 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IL36RNQ9UBH0 155 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ERRFI1Q9UJM3 462 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PLCE1Q9P212 2302 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CRYABP02511 175 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CA6P23280 308 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 F2RP25116 425 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 G0S2P27469 103 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SUMO1P63165 101 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 Q3ZCU0 254 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SAPCD1Q5SSQ6 148 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF529Q6P280 563 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TMPRSS7Q7RTY8 843 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 RND1Q92730 232 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 NABP1Q96AH0 204 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 WBP1Q96G27 269 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PLPPR2Q96GM1 343 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TCEAL7Q9BRU2 100 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SH3BGRL3Q9H299 93 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 IGHV3-43A0A0B4J1X8 118 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ZIC3O60481 467 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 NGFP01138 241 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SCTP09683 121 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 IGHV3-43DP0DP04 118 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 MDKP21741 143 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TAGLN2P37802 199 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CEBPDP49716 269 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 IL13RA2Q14627 380 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 CXorf66Q5JRM2 361 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ATP1A1-AS1Q5TC04 95 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FAM27BQ5VT28 67 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 OR10AD1Q8NGE0 317 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 OR10V1Q8NGI7 309 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 ADAMTS17Q8TE56 1095 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 C1orf147Q96MC9 270 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-202ENST00000398417 FAM234AQ9H0X4 552 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 PARP11Q9NR21 331 aa4.26□□□□□ -1.73
SMAD4-202ENST00000398417 TCFL5Q9UL49 500 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms