RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PNKDQ8N490 385 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 RFESDQ8TAC1 157 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 SETD6Q8TBK2 473 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 MS4A7Q9GZW8 240 aaPredicted RBP20.72■□□□□ 0.91
U2AF1-203ENST00000398137 IGHV1-69DA0A0B4J2H0 117 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 SERPINE3A8MV23 424 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 C12orf77C9JDV5 145 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 HPGDSO60760 199 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 IGHV1-69P01742 117 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 CD3GP09693 182 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 HKR1P10072 659 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 LTC4SQ16873 150 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 CDNFQ49AH0 187 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 RBMS3Q6XE24 437 aaKnown RBP20.71■□□□□ 0.91
U2AF1-203ENST00000398137 DTX3Q8N9I9 347 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 TAF15Q92804 592 aaKnown RBP eCLIP20.71■□□□□ 0.91
U2AF1-203ENST00000398137 ARL11Q969Q4 196 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 DCUN1D5Q9BTE7 237 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 HEXA-AS1Q9H8Q6 139 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 DIABLOQ9NR28 239 aa20.71■□□□□ 0.91
U2AF1-203ENST00000398137 MBNL3Q9NUK0 354 aaKnown RBP20.71■□□□□ 0.91
U2AF1-203ENST00000398137 ELF5Q9UKW6 265 aaPredicted RBP20.71■□□□□ 0.91
U2AF1-203ENST00000398137 TRAV18A0A075B6X5 111 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 FAM172BPA6NC97 362 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 TMEM235A6NFC5 223 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 C15orf65H3BRN8 121 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 GZMHP20718 246 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 MRPS15P82914 257 aaKnown RBP20.7■□□□□ 0.9
U2AF1-203ENST00000398137 GUCA2AQ02747 115 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 BAMBIQ13145 260 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 ARFRP1Q13795 201 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 ARL6IP1Q15041 203 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 SLC9A3R2Q15599 337 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 C3orf56Q8N813 242 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 S100A16Q96FQ6 103 aaKnown RBP20.7■□□□□ 0.9
U2AF1-203ENST00000398137 RIMS4Q9H426 269 aaPredicted RBP20.7■□□□□ 0.9
U2AF1-203ENST00000398137 LINC00574Q9H8X3 128 aa20.7■□□□□ 0.9
U2AF1-203ENST00000398137 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.7■□□□□ 0.9
U2AF1-203ENST00000398137 A0A0A6YYH2 397 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 A6NJ64 397 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 NPIPB11E5RHQ5 1161 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 ORC5O43913 435 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 RNASE1P07998 156 aaKnown RBP20.69■□□□□ 0.9
U2AF1-203ENST00000398137 NFYBP25208 207 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 FOXB2Q5VYV0 432 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 TRAT1Q6PIZ9 186 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 MOB1BQ7L9L4 216 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 PRR18Q8N4B5 295 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 KIRREL1Q96J84 757 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 TMEM133Q9H2Q1 129 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 PRDM13Q9H4Q3 707 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 TAF9BQ9HBM6 251 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 IDI2-AS1Q9NZ38 188 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 KCNIP1Q9NZI2 227 aa20.69■□□□□ 0.9
U2AF1-203ENST00000398137 TRBV6-6A0A0A6YYG2 114 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 CLDN34H7C241 214 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 APOA1P02647 267 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 GSTP1P09211 210 aaKnown RBP20.68■□□□□ 0.9
U2AF1-203ENST00000398137 ELK1P19419 428 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 ZNF260Q3ZCT1 412 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 ZNF880Q6PDB4 577 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 C5orf24Q7Z6I8 188 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 OR1L1Q8NH94 360 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 NUDCD2Q8WVJ2 157 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 NDUFA13Q9P0J0 144 aa20.68■□□□□ 0.9
U2AF1-203ENST00000398137 SPINT2O43291 252 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 HBZP02008 142 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 UBE2E1P51965 193 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 DEFB112Q30KQ8 113 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 TMEM69Q5SWH9 247 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 UTF1Q5T230 341 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 HACD4Q5VWC8 232 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 OR13D1Q8NGV5 346 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 CMTM3Q96MX0 182 aa20.67■□□□□ 0.9
U2AF1-203ENST00000398137 SLIRPQ9GZT3 109 aaKnown RBP20.67■□□□□ 0.9
U2AF1-203ENST00000398137 IGHV2-26A0A0B4J1V2 119 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 FAM25AB3EWG3 89 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 FAM25CB3EWG5 89 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 FAM25GB3EWG6 89 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 NPFFO15130 113 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 XRCC3O43542 346 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 FCGR3AP08637 254 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 GNG2P59768 71 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 HMGN3Q15651 99 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 OR52W1Q6IF63 320 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 PIP4P2Q8N4L2 257 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 LEAP2Q969E1 77 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 DGCR14Q96DF8 476 aaKnown RBP20.66■□□□□ 0.9
U2AF1-203ENST00000398137 AUNIPQ9H7T9 357 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 ZNF286AQ9HBT8 521 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 Q9N2K0 584 aa20.66■□□□□ 0.9
U2AF1-203ENST00000398137 IGHV3-43A0A0B4J1X8 118 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 SDCBPO00560 298 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-203ENST00000398137 CTDSP2O14595 271 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 RGS5O15539 181 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 IGHV3-43DP0DP04 118 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 PTHLHP12272 177 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 TALDO1P37837 337 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 TAS2R20P59543 309 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 MADCAM1Q13477 382 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms