RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 LTBRP36941 435 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
CCDC40-204ENST00000397545 FOXC1Q12948 553 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 IZUMO4Q1ZYL8 232 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 TPRX1Q8N7U7 411 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 MEGF10Q96KG7 1140 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-204ENST00000397545 TRIOO75962 3097 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 LOC101059948A0A1B0GTJ6 334 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 PAGE4O60829 102 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 CLEC3BP05452 202 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 PSG2P11465 335 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
CCDC40-204ENST00000397545 MEOX1P50221 254 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 ATP5SQ99766 215 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 OR2H1Q9GZK4 316 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 TRGV10A0A0A0MS01 117 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 MS4A18H0YCH9 400 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 CDS2O95674 445 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 IL3RAP26951 378 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM50BP56557 158 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 TPPP2P59282 170 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 MS4A18Q3C1V0 323 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 VAX1Q5SQQ9 334 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM252Q8N6L7 170 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 LRRC29Q8WV35 223 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-204ENST00000397545 VPS25Q9BRG1 176 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM204Q9BSN7 226 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 GPR87Q9BY21 358 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 C5orf66Q9H5L9 145 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 KIAA2026Q5HYC2 2103 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 MSGN1A6NI15 193 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 MBPP02686 304 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-204ENST00000397545 FCGR3AP08637 254 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 HOXD4P09016 255 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-204ENST00000397545 SMIM6P0DI80 62 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 PPP1CCP36873 323 aaKnown RBP9.36□□□□□ -0.91
CCDC40-204ENST00000397545 AMTP48728 403 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 SULT1A2P50226 295 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 NAAAQ02083 359 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 HIKESHIQ53FT3 197 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 PTX4Q96A99 478 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 LHFPL6Q9Y693 200 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 PRR19A6NJB7 356 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 HLA-GP17693 338 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 FSTP19883 344 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 MAGEA5P43359 124 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 Q8IYB0 196 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 FLVCR1-AS1Q8TAF5 88 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 POM121L2Q96KW2 1035 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 OR5H1A6NKK0 313 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 C11orf94C9JXX5 98 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 H0YL77 283 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 SCTP09683 121 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 DEFB124Q8NES8 71 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 OR10A7Q8NGE5 316 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF501Q96CX3 271 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-204ENST00000397545 HES4Q9HCC6 221 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM38BQ9NVV0 291 aa9.36□□□□□ -0.91
CCDC40-204ENST00000397545 OR5B21A6NL26 309 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 DHRS7CA6NNS2 312 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 K7EQM0 130 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 CHRNB4P30926 498 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 G6PCP35575 357 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 RPS11P62280 158 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 RBPJQ06330 500 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 GAMTQ14353 236 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 S100A7AQ86SG5 101 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM147Q9BVK8 224 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 GPR35Q9HC97 309 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PIPOXQ9P0Z9 390 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 RALGAPA1Q6GYQ0 2036 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 TRBV23-1A0A0A0MS06 115 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 IGHV5-10-1A0A0J9YXX1 117 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 TRGC2P03986 189 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 FGF2P09038 288 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PAX5Q02548 391 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 MOB1BQ7L9L4 216 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 APCDD1LQ8NCL9 501 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 OIT3Q8WWZ8 545 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 TAAR9Q96RI9 348 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PRRG2O14669 202 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PMELP40967 661 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 RPS23P62266 143 aaKnown RBP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 UBE2V2Q15819 145 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 DTD1Q8TEA8 209 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PCED1AQ9H1Q7 454 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 GNB4Q9HAV0 340 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms