RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TRAV41A0A0B4J266 112 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 AQP12BA6NM10 295 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 ZAR1LA6NP61 321 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 B2RBV5 119 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 C12orf77C9JDV5 145 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 C15orf65H3BRN8 121 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 ARPC1BO15143 372 aaKnown RBP7.22□□□□□ -1.25
NEDD9-203ENST00000397378 ATP6V0E1O15342 81 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 FAM107AO95990 144 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 IGLV1-51P01701 117 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 HLA-DRB1P01911 266 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 TMEM225BP0DP42 221 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 SLC2A2P11168 524 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-203ENST00000397378 DAPP51397 102 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 PITPNAQ00169 270 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 KISS1Q15726 138 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 C12orf73Q69YU5 71 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 FAM220AQ7Z4H9 259 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 AQP12AQ8IXF9 295 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 MINDY2Q8NBR6 621 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 UTP4Q969X6 686 aaKnown RBP7.22□□□□□ -1.25
NEDD9-203ENST00000397378 NR1H4Q96RI1 486 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-203ENST00000397378 IL4I1Q96RQ9 567 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 TMED9Q9BVK6 235 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 ALX4Q9H161 411 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-203ENST00000397378 FRRS1LQ9P0K9 344 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
NEDD9-203ENST00000397378 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 A0A087WW49 117 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 IGHV7-81A0A0B4J1V7 117 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 TRAV39A0A0B4J263 110 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 NUPR2A6NF83 97 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 SDCBPO00560 298 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-203ENST00000397378 ORC5O43913 435 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 BRI3O95415 125 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 LGALS1P09382 135 aaKnown RBP7.21□□□□□ -1.26
NEDD9-203ENST00000397378 EPHA2P29317 976 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 CCR9P51686 369 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 ZNF85Q03923 595 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 MMDQ15546 238 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 TP53I3Q53FA7 332 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 C19orf54Q5BKX5 351 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 SLC25A48Q6ZT89 311 aaKnown RBP7.21□□□□□ -1.26
NEDD9-203ENST00000397378 KCTD20Q7Z5Y7 419 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 HAPLN4Q86UW8 402 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 ARL6IP6Q8N6S5 226 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 OR10H4Q8NGA5 316 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 OR13C3Q8NGS6 347 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 ARL11Q969Q4 196 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 FLYWCH2Q96CP2 140 aaKnown RBP7.21□□□□□ -1.26
NEDD9-203ENST00000397378 DPCDQ9BVM2 203 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-203ENST00000397378 FAM107BQ9H098 131 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 HIPK2Q9H2X6 1198 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 IFT22Q9H7X7 185 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 FAM53CQ9NYF3 392 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 STUB1Q9UNE7 303 aa7.21□□□□□ -1.26
NEDD9-203ENST00000397378 TMEM30CPA0ZSE6 113 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 SOX15O60248 233 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 DCTN3O75935 186 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 HSPB1P04792 205 aaKnown RBP7.2□□□□□ -1.26
NEDD9-203ENST00000397378 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-203ENST00000397378 NANOS3P60323 173 aaKnown RBP7.2□□□□□ -1.26
NEDD9-203ENST00000397378 LSAMPQ13449 338 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 ZNF691Q5VV52 312 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 SUMF2Q8NBJ7 301 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 CCDC124Q96CT7 223 aaKnown RBP7.2□□□□□ -1.26
NEDD9-203ENST00000397378 NABP2Q9BQ15 211 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 ELOVL1Q9BW60 279 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 PARP11Q9NR21 331 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 ARL2BPQ9Y2Y0 163 aa7.2□□□□□ -1.26
NEDD9-203ENST00000397378 IGHV3-43A0A0B4J1X8 118 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 A0A1W2PN81 502 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 OR4C45A6NMZ5 311 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 SLC31A2O15432 143 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 SULT1B1O43704 296 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 LANCL1O43813 399 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 FKBP6O75344 327 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 HTR1AP08908 422 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 IGHV3-43DP0DP04 118 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 BLVRBP30043 206 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-203ENST00000397378 ATP6V1E1P36543 226 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 CHRNA7P36544 502 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 PSMD7P51665 324 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 ACTBP60709 375 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 C5orf64Q2M2E5 130 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 CT45A1Q5HYN5 189 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 STEAP3Q658P3 488 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 ASCL4Q6XD76 172 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 SERPINA12Q8IW75 414 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 PARP16Q8N5Y8 322 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 TCTEX1D1Q8N7M0 179 aa7.19□□□□□ -1.26
NEDD9-203ENST00000397378 OR5D14Q8NGL3 314 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms